Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_O16
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 314 5e-86
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 314 5e-86
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 217 7e-76
Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF016679-7|AAB66161.1| 333|Caenorhabditis elegans Hypothetical ... 30 1.3
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 30 1.7
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ... 29 3.0
U29382-1|AAG00006.1| 382|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical pr... 28 6.9
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 6.9
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 9.1
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 314 bits (770), Expect = 5e-86
Identities = 151/225 (67%), Positives = 183/225 (81%), Gaps = 2/225 (0%)
Frame = +2
Query: 2 YINLCDALNAWQLVKELKEALGLPAAASFKHVSPAGAAVGLPLTKEDASVCMVSDL-LEA 178
YIN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + +A+ CMVSDL ++
Sbjct: 107 YINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVSDLPIDT 166
Query: 179 LTP-LACAYARARGADRMSSFGDFVALSDACDEATARIISREVSDGIVAPGYTPEALNIL 355
P LA AYARARGADRMSSFGDF+ALS+ CDE TA+II+REVSDG+VAP + P AL++L
Sbjct: 167 KKPSLAAAYARARGADRMSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALSLL 226
Query: 356 RKKKGGNYCVLQMDPSYEPDLTERKTLYGLSLEQRRNDAKITAGLFGNIVTAKKELPEEA 535
KKK GNYCVL+++P+Y P TE +T++GL L Q+RN+A I A F N+V + EL ++A
Sbjct: 227 AKKKNGNYCVLKINPNYLPSETEERTVFGLRLRQKRNNAVINAETFNNVVGSANELNKQA 286
Query: 536 VRDLIVATIALKYTQSNSVCYARDGQVIGIGAGPQSRIHCTRLAG 670
+ DLIVATIALKY QSNSVC+A GQVIG+GAG QSRIHCTRLAG
Sbjct: 287 IDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAG 331
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 314 bits (770), Expect = 5e-86
Identities = 151/225 (67%), Positives = 183/225 (81%), Gaps = 2/225 (0%)
Frame = +2
Query: 2 YINLCDALNAWQLVKELKEALGLPAAASFKHVSPAGAAVGLPLTKEDASVCMVSDL-LEA 178
YIN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + +A+ CMVSDL ++
Sbjct: 237 YINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVSDLPIDT 296
Query: 179 LTP-LACAYARARGADRMSSFGDFVALSDACDEATARIISREVSDGIVAPGYTPEALNIL 355
P LA AYARARGADRMSSFGDF+ALS+ CDE TA+II+REVSDG+VAP + P AL++L
Sbjct: 297 KKPSLAAAYARARGADRMSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALSLL 356
Query: 356 RKKKGGNYCVLQMDPSYEPDLTERKTLYGLSLEQRRNDAKITAGLFGNIVTAKKELPEEA 535
KKK GNYCVL+++P+Y P TE +T++GL L Q+RN+A I A F N+V + EL ++A
Sbjct: 357 AKKKNGNYCVLKINPNYLPSETEERTVFGLRLRQKRNNAVINAETFNNVVGSANELNKQA 416
Query: 536 VRDLIVATIALKYTQSNSVCYARDGQVIGIGAGPQSRIHCTRLAG 670
+ DLIVATIALKY QSNSVC+A GQVIG+GAG QSRIHCTRLAG
Sbjct: 417 IDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAG 461
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 217 bits (531), Expect(2) = 7e-76
Identities = 112/195 (57%), Positives = 141/195 (72%), Gaps = 19/195 (9%)
Frame = +2
Query: 2 YINLCDALNAWQLVKELKEALGLPAAASFKHVSPAGAAVGLPLTKEDASVCMVSDL-LEA 178
YIN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + +A+ CMVSDL ++
Sbjct: 12 YINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVSDLPIDT 71
Query: 179 LTP-LACAYARAR-----------------GADRMSSFGDFVALSDACDEATARIISREV 304
P LA AYARAR GADRMSSFGDF+ALS+ CDE TA+II+REV
Sbjct: 72 KKPSLAAAYARAREQDWMIADRLQRIAPSIGADRMSSFGDFIALSEKCDELTAKIINREV 131
Query: 305 SDGIVAPGYTPEALNILRKKKGGNYCVLQMDPSYEPDLTERKTLYGLSLEQRRNDAKITA 484
SDG+VAP + P AL++L KKK GNYCVL+++P+Y P TE +T++GL L Q+RN+A I A
Sbjct: 132 SDGVVAPDFDPAALSLLAKKKNGNYCVLKINPNYLPSETEERTVFGLRLRQKRNNAVINA 191
Query: 485 GLFGNIVTAKKELPE 529
F N+V + E+ +
Sbjct: 192 ETFNNVVGSANEVSD 206
Score = 84.6 bits (200), Expect(2) = 7e-76
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +2
Query: 518 ELPEEAVRDLIVATIALKYTQSNSVCYARDGQVIGIGAGPQSRIHCTRLAG 670
+L ++A+ DLIVATIALKY QSNSVC+A GQVIG+GAG QSRIHCTRLAG
Sbjct: 237 QLNKQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAG 287
>Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical
protein ZK829.7 protein.
Length = 372
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Frame = -1
Query: 433 CLTLREVRLVTRVHL*NAIVAAFLFPQY-----VQSFG--CIPGGDD-TVGHFARYYP 284
CLT REV + + N I LFP Y V+SFG C PG D T+G +P
Sbjct: 45 CLTDREVSNTKQARITNGIKDTSLFPGYEVSGIVESFGAECTPGDYDLTIGDKVIVWP 102
>AF016679-7|AAB66161.1| 333|Caenorhabditis elegans Hypothetical
protein T28C12.6 protein.
Length = 333
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 237 NELMRSAPRARAYAHASGVSASSKSDTIHTDASSLVKGSPTAAPAGDTCLKLAAAGRPSA 58
N+L+ S P R Y H+ S S +S TI T + L +GS P+ +C + +
Sbjct: 180 NDLVGSLPLCRNYFHSCMTSTSCESGTICT--NGLEQGSCCTNPSQASCPSVTSMNINCR 237
Query: 57 SFNSLTSC 34
S+ C
Sbjct: 238 KLRSVNWC 245
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = -2
Query: 267 HASDRATKSPNELMRSAPRARAYAHASGVSASSKSDTIHTDASSLVKGSPTAAP--AGDT 94
+++ AT S L +AP+ A + S + + T A+S + G+PT+AP A T
Sbjct: 235 NSAPAATASSGGLFGAAPKPAAPSGGLFGSTAPATTAATTTATSGLFGAPTSAPSSAPAT 294
Query: 93 CLKLAAAGRPSASFNSLTSCQAFNAS 16
A+ P+A+ L S A +AS
Sbjct: 295 GGLFGASTAPAAATGGLFSIGAASAS 320
>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
protein K10E9.1 protein.
Length = 1451
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +2
Query: 344 LNILRKKKGGNY--CVLQMDPSYEP-----DLTERKTLYGLSLEQRRN 466
+NI + G Y C++ + SY+ DL E+K L L L+QRRN
Sbjct: 924 MNISKSMTQGEYATCIMMLLTSYDSSHFVADLIEKKQLGKLKLQQRRN 971
>U29382-1|AAG00006.1| 382|Caenorhabditis elegans Hypothetical
protein R03H10.2 protein.
Length = 382
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 204 AYAHASGVSASSKSDTIHTDASSLVKGSPTAAPAG 100
AY SG +S SD DAS L K AP+G
Sbjct: 342 AYFATSGAFSSRSSDISRIDASELFKNPINRAPSG 376
>Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 78 RLVSNTCPPPEPPWDCL*LRKMRRCVWYRIYWK 176
RL CPPPE P + + VW + YW+
Sbjct: 416 RLTVKLCPPPEDP-NFTMCTAFSKSVWQKDYWQ 447
>Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 78 RLVSNTCPPPEPPWDCL*LRKMRRCVWYRIYWK 176
RL CPPPE P + + VW + YW+
Sbjct: 416 RLTVKLCPPPEDP-NFTMCTAFSKSVWQKDYWQ 447
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -2
Query: 318 TIPSDTSRDIILAVASSHASDRATKSPNELMRSAPRARAYAHASGVSASSKS 163
++ + S ++ L+ +SSH+ S L + P+ AY+HAS S+S+ S
Sbjct: 244 SMTAPVSPNVPLSASSSHSEGWKYSSQKLLWKLKPKY-AYSHASSTSSSTDS 294
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -2
Query: 318 TIPSDTSRDIILAVASSHASDRATKSPNELMRSAPRARAYAHASGVSASSKS 163
++ + S ++ L+ +SSH+ S L + P+ AY+HAS S+S+ S
Sbjct: 244 SMTAPVSPNVPLSASSSHSEGWKYSSQKLLWKLKPKY-AYSHASSTSSSTDS 294
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -2
Query: 195 HASGVSASSKSDTIHTDASSLVKGSPTAAPAGDTCLKLAAAGRPSASFNSLTSCQAFNAS 16
H G++ TI+ SSL GS + P G + + + A R S+++ + S + +S
Sbjct: 1463 HRPGITPPLAPKTIYP--SSLQTGSSSPTPPGTSSIIVVAGSRASSNYPTTASIETDGSS 1520
Query: 15 HK 10
+
Sbjct: 1521 EE 1522
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,228,677
Number of Sequences: 27780
Number of extensions: 282546
Number of successful extensions: 980
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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