Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_O15
(509 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1587 + 38468956-38469090,38470599-38470742,38470819-384708... 50 1e-06
01_06_1428 - 37301697-37302175,37302300-37302471,37302570-373034... 42 2e-04
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 39 0.003
12_01_0117 + 893924-893971,894944-895003,895024-895174,895410-89... 31 0.71
01_03_0053 + 12050631-12051620 31 0.71
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 29 2.2
12_02_0556 + 20415683-20416841,20417563-20417726,20417837-204179... 28 3.8
06_01_0558 - 3968211-3969475,3970198-3970266,3970374-3970529,397... 28 3.8
10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800 28 5.0
03_02_0009 + 4891545-4892147,4892757-4893308 28 5.0
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 27 6.6
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 27 6.6
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 27 6.6
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85... 27 8.8
07_03_0702 + 20820796-20821495,20821569-20822119,20822254-20823018 27 8.8
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 27 8.8
>01_06_1587 +
38468956-38469090,38470599-38470742,38470819-38470845,
38470970-38471060,38471224-38471267,38471352-38471450,
38472233-38472331,38472545-38472646,38472758-38472823,
38472960-38473084,38473175-38473346,38473588-38473674
Length = 396
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +2
Query: 176 PPLVILHGLLGSKNNWNSMSKAIHRTTGR-KVISVDARNHGDS---RHSLQHTYIHMAHD 343
P V+LHG+LGS+ NW S +K + + + + VD R HGDS + HT A D
Sbjct: 117 PTAVLLHGILGSRKNWGSFAKRLAQEFPMWQFLLVDLRCHGDSASIKKRGPHTVASTALD 176
Query: 344 VMXXXXXXXXXXVSIMGHSMGGR 412
V+ ++GHS GG+
Sbjct: 177 VLKLIVQLRLTPRVLVGHSFGGK 199
>01_06_1428 -
37301697-37302175,37302300-37302471,37302570-37303403,
37303847-37304012,37304334-37304573,37304765-37304905,
37305623-37305735,37306549-37306614,37307242-37307480,
37307615-37307897
Length = 910
Score = 42.3 bits (95), Expect = 2e-04
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Frame = +2
Query: 59 SRIFSNYVFRHASSTSENAETIDLAYASYESTGDVENSRPPLVILHGLLGSKNNWNSMSK 238
S + S+ V AS+ +E LA+ + + + + S +LHGLLGS NW S S+
Sbjct: 28 SHVLSSSVHSEASNQTET-----LAFDEIQLSPE-KPSTATAFVLHGLLGSGRNWRSFSR 81
Query: 239 AI-----HRTTGR--KVISVDARNHGDSR--HSLQ--HTYIHMAHDVMXXXXXXXXXXVS 385
A+ R+ +++ VD RNHG S L+ H A D+
Sbjct: 82 ALASELRDRSPSDEWRMVLVDLRNHGRSAGIKGLRPPHDMSTAARDLADLVKARGWAWPD 141
Query: 386 -IMGHSMGGRTAM 421
++GHSMGG+ A+
Sbjct: 142 VVVGHSMGGKVAL 154
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Frame = +2
Query: 182 LVILHGLLGSKNNWNSMSKAIHRTTGRKVISVDARNHGDS---RHSLQH------TYIHM 334
++ LHG LG+ +W M KA+ + +VI+VD HG+S +H +++ + +
Sbjct: 1483 ILFLHGFLGTSEDWVPMMKAL--SPSARVIAVDLPGHGESEILQHDVENSNQISFSVQSV 1540
Query: 335 AHDVMXXXXXXXXXXVSIMGHSMGGRTAM 421
A ++ V ++G+SMG R A+
Sbjct: 1541 ADLLLKLIRNITDGAVVVVGYSMGARIAL 1569
>12_01_0117 +
893924-893971,894944-895003,895024-895174,895410-895884,
895974-896316,896347-896391,896533-896631,896708-896828,
897032-897255
Length = 521
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 179 PLVILHGLLGSKNNWNSMSKAIHRTTGRKVISVD 280
P+V+LHG S +W + + + R G KV++ D
Sbjct: 164 PIVLLHGFGSSVFSWTHIMRPLARIAGAKVLAFD 197
>01_03_0053 + 12050631-12051620
Length = 329
Score = 30.7 bits (66), Expect = 0.71
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = +2
Query: 8 HLIRLHNEKTFKSLCVCSRIFSNYVFRHASSTSENAETIDLAYASYESTGDVENSRPPLV 187
H + +EK+ ++ + H SST N + + + G +
Sbjct: 3 HPVAEADEKSPFGRLTAEEFYARHGVLHTSSTFVNPRGLRIFTQRWVPAGGDAPLLGAIA 62
Query: 188 ILHGLLGSKNNWNSMSKAIH-RTTGRKVISVDARNHGDS 301
++HG G +++W A+H G V +VD + HG S
Sbjct: 63 VVHGFTG-ESSWTVQLTAVHFAKAGFAVAAVDHQGHGFS 100
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 209 SKNNWNSMSKAIHRTTGRKVISVDARNHGDSRHSLQH 319
S+N+ + +S + H+ GRKVIS ++ N + QH
Sbjct: 250 SRNSGDDISSSFHKEQGRKVISRNSENDRVASFHKQH 286
>12_02_0556 +
20415683-20416841,20417563-20417726,20417837-20417926,
20427889-20429145
Length = 889
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 152 TGDVENSRPPLVILHGLLGSKNNWNSMSKAIHRTTGRKVISVDARNHGDSRHSLQHT 322
T E R L + H L+ S +N + + IH T I A NHG++ S H+
Sbjct: 781 TKTAEIQRTTLRLSHQLVSSNSNIDDI---IHSTNAPPAIPDSAINHGNNTFSTNHS 834
>06_01_0558 -
3968211-3969475,3970198-3970266,3970374-3970529,
3971075-3971405
Length = 606
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 59 SRIFSNYVFRHASSTSENAETIDLAYASYESTGDVENSRPPLVILHGLLGSKNN 220
S+ F +F A S EN T+DL+Y + +G++ S P + ++ L+ + NN
Sbjct: 401 SKNFFQGIFPSAVSHLENLSTLDLSYNNI--SGEITASFPTTMSMNHLVLNDNN 452
>10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800
Length = 332
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 101 TSENAETIDLAYASYESTG-DVENSRPPLVILHGLLGSKNNWNSMSKAIHRTTGRKVISV 277
T+ D + +YE +G E +R +V HG GS+ + S + G +++
Sbjct: 33 TAPRVRLSDGRHLAYEESGVPKEAARYKIVFSHGFTGSRLDSLRASPEVAEELGVYMVAF 92
Query: 278 DARNHGDSRHSLQHTYIHMAHDV 346
D +G+S + T A D+
Sbjct: 93 DRAGYGESDPNPNRTVKSAALDM 115
>03_02_0009 + 4891545-4892147,4892757-4893308
Length = 384
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 80 VFRHASSTSENAETIDLAYASYESTGDVENSRPPLVILHGLLGS 211
V +HA+S + L ++S +STG NSR +HG+L +
Sbjct: 165 VGQHATSGPNVQSMLRLDFSSGQSTGTASNSRLHRRNIHGILNA 208
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 53 VCSRIFSNYVFRHASSTSENAETIDLAYASYESTGDVENSRPPLVILHGLLGSK 214
+C + N F S+ A T+ Y++ G V N PP+ + + GSK
Sbjct: 253 LCDYMVKNGPFDGLLGFSQGA-TLSALLIGYQAQGKVLNDHPPIKFMVSIAGSK 305
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 27.5 bits (58), Expect = 6.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 335 PYVYTCVAKNACCHHGYG 282
PY + + CCHHG+G
Sbjct: 256 PYPFPSWPSDCCCHHGHG 273
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 330 CIYVCCKECLLSPWLRAS 277
C + C+ECLLS W AS
Sbjct: 765 CAHRLCRECLLSSWRSAS 782
>11_01_0110 +
850780-850805,851465-851537,851558-851720,851947-852260,
852330-852409,852506-852848,853068-853166,853240-853360,
853567-853723,853976-854099,855275-855368,855866-857259,
857882-857924,858240-858458,859379-859605,859701-859948,
860246-860552,860725-861153
Length = 1486
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 179 PLVILHGLLGSKNNWNSMSKAIHRTTGRKVIS 274
P+V+LHG S +W + + + R G K I+
Sbjct: 164 PIVLLHGFGSSVFSWTHIMRPLARIAGAKPIN 195
>07_03_0702 + 20820796-20821495,20821569-20822119,20822254-20823018
Length = 671
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 306 CLLSPWLRASTLITFLPVVLCIALLILFQL-FLEPN 202
C ++ +L + L TFLPV++ + L++ L +PN
Sbjct: 635 CFVTSFLAKTLLRTFLPVLIAVTLVVAIVLNIAKPN 670
>04_03_0496 +
16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 17 RLHNEKTFKSLCVCSRIFSNYVFRHASSTSENAETIDLAYASYESTGDVENSRPPLVILH 196
RL + ++ +S+C S A STS+ E + AY + +S V + ++ ++
Sbjct: 437 RLTDSRSMQSMCQVYASVSYICMGDAESTSQALELVGPAYRTMDSFVGV-REKTCIIFVY 495
Query: 197 GLL 205
GLL
Sbjct: 496 GLL 498
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,574,183
Number of Sequences: 37544
Number of extensions: 233578
Number of successful extensions: 625
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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