Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O05
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.77 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.8  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    22   4.1  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   7.2  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   7.2  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   7.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 250  CFFRKPEQFIA 218
            C FRKPE F+A
Sbjct: 1615 CLFRKPEHFVA 1625


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 3   RMYRLLSLAVILVAVEACRPPPCHWSDGR 89
           R  RLL   V +++   C PP   W D R
Sbjct: 180 RRARLLVATVWILSFVICFPPLVGWKDKR 208


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 232 EQFIAILNSFSPKRYFMRCRVL 167
           EQ +A+ N F   RY   C  L
Sbjct: 18  EQLVALENKFKTTRYLSVCERL 39


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 438 QKTCDDVNEVILTVPEAESE 497
           Q+T DD+NEV   V + + +
Sbjct: 41  QQTVDDINEVNFDVEDEKPQ 60


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 438 QKTCDDVNEVILTVPEAESE 497
           Q+T DD+NEV   V + + +
Sbjct: 41  QQTVDDINEVNFDVEDEKPQ 60


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 324 DVRVVPQYLNVYRSKWAYENN 386
           D+  VP YLN Y+  +  E +
Sbjct: 202 DIINVPAYLNTYKGDFPTETD 222


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 285  SSPPDSWTSHRNVSSGNR 232
            +SPP + TS ++VSS  R
Sbjct: 1752 ASPPPAATSMKSVSSRRR 1769


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 285  SSPPDSWTSHRNVSSGNR 232
            +SPP + TS ++VSS  R
Sbjct: 1748 ASPPPAATSMKSVSSRRR 1765


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,122
Number of Sequences: 438
Number of extensions: 3083
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)