Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_O04
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 39 0.003
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 39 0.003
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 38 0.005
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 31 0.41
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 30 0.94
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 30 0.94
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z83237-4|CAB05788.1| 356|Caenorhabditis elegans Hypothetical pr... 28 3.8
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 28 3.8
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 3.8
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 28 5.0
AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical... 27 8.7
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 46.4 bits (105), Expect = 1e-05
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Frame = +3
Query: 210 TTHSTMTIVKNTACEVGIPCY--CALEYAPVCGSDGKTYAN*CSLECTQKIIPS------ 365
T +TI K C C C EY+PVC S+G+ N C L+ + ++ +
Sbjct: 849 TFGDVLTIDKFEVCNEVKECNNACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGD 908
Query: 366 -LTMEHDGECQGAKLASLHPCICTREKDPVRGSDGVTYSNLCLL---KCASLSKTK 521
L ++DGEC + C + PV ++GVT++N+CL+ C + K K
Sbjct: 909 KLVKDYDGEC-----CRIENCDIS-VFSPVCDTEGVTHANMCLMDQNACIQMKKNK 958
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = +3
Query: 267 CYCALEYAPVCGSDGKTYAN*CSLECTQKIIPSLTMEHDGECQGAKLASLHPCICTREKD 446
C C PVCG+D TY N C L C Q+ L ++G C K C +
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK-------ECEKVGT 71
Query: 447 PVRGSDGVTYSNLC 488
P+ + G T+ N C
Sbjct: 72 PICDNFGETHINDC 85
Score = 40.3 bits (90), Expect = 9e-04
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 110 PPPLCICGKIYSPVCGSDGKTYENPCEFYC 199
PPP C C + PVCG+D TY N C C
Sbjct: 15 PPPDCDCPSVIRPVCGTDNVTYNNLCFLRC 44
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +3
Query: 273 CALEYAPVCGSDGKTYAN*C---SLECTQK--IIPSLTMEHDGECQGAKLASLHPCICTR 437
C P+C + G+T+ N C +C K + SLT H G C H C T
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCN--HNCTNT- 122
Query: 438 EKDPVRGSDGVTYSNLCLLK 497
E DPV ++G Y NLC+ +
Sbjct: 123 EFDPVCDTNGSVYRNLCVFQ 142
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 273 CALEYAPVCGSDGKTYAN*CSL--ECTQKIIPSLTMEHDGECQGAKLASLHPCICTREKD 446
C Y P+CG++G T+ N CSL E + ++ + + G C C +
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN--------CPSDFS 823
Query: 447 PVRGSDGVTYSNLC 488
PV S G T+ N+C
Sbjct: 824 PVCDSKGSTHQNIC 837
Score = 37.1 bits (82), Expect = 0.008
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +3
Query: 273 CALEYAPVCGSDGKTYAN*CSLECTQKIIPSLTME-HDGECQGAKLASLHPCICTREKDP 449
C + PVC S G + N C ++ I S + H + CT +K P
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTDDKHP 596
Query: 450 VRGSDGVTYSNLCLLKCASLSKTKLE 527
+ SD TY NLC + ++LE
Sbjct: 597 ICASDFSTYENLCQFRKQKCLDSELE 622
Score = 35.9 bits (79), Expect = 0.019
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 423 CICTREKDPVRGSDGVTYSNLCLLKCASLSKTKL 524
C C PV G+D VTY+NLC L+C + L
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDL 52
Score = 33.9 bits (74), Expect = 0.076
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +3
Query: 294 VCGSDGKTYAN*CSLE---CTQKIIPSLTME--HDGECQGAKLASLHPCICTREKDPVRG 458
VC S+G+T+ N C + C + I T+ H GEC LAS C + PV
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC--CALAS-----CPKTGQPVCD 1082
Query: 459 SDGVTYSNLC 488
S G T+ +LC
Sbjct: 1083 SRGRTHDSLC 1092
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEF---YCEKDNDT 217
C Y P+CG++G T+ N C CE N T
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANST 804
Score = 31.5 bits (68), Expect = 0.41
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 146 PVCGSDGKTYENPCEFYCEKDNDTQ 220
P+C SD TYEN C+F +K D++
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSE 620
Score = 31.5 bits (68), Expect = 0.41
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCE 190
C K YSPVC S+G+ N CE
Sbjct: 872 CPKEYSPVCASNGQNIVNECE 892
Score = 30.7 bits (66), Expect = 0.71
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEF 193
C +SPVC S G T++N C F
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHF 839
Score = 30.3 bits (65), Expect = 0.94
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 119 LCICGKIYSPVCGSDGKTYENPCEFYCEK 205
L C K PVC S G+T+++ C F+ K
Sbjct: 1070 LASCPKTGQPVCDSRGRTHDSLCHFHNSK 1098
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 429 CTREKDPVRGSDGVTYSNLCLLK---CASLSKT 518
C DP+ G++GVT++N C L+ C S + T
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANST 804
Score = 29.1 bits (62), Expect = 2.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEF 193
C K + PVC + +T++N C+F
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQF 278
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +3
Query: 273 CALEYAPVCGSDGKTYAN*CSLECTQKIIPSLTMEHDGECQGAKLASLHPCICTREKDP 449
C + P+C SD TY N C + + L + G+C L S PC E P
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSEC-LDS--PCALPAENSP 645
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEF 193
C K+ +P+C + G+T+ N C F
Sbjct: 66 CEKVGTPICDNFGETHINDCHF 87
Score = 28.3 bits (60), Expect = 3.8
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +3
Query: 204 RTTTHSTMTIVKNTACEVGIPCYCALEYAPVCGSDGKTYAN*CSLECTQKII-------P 362
+T + T+ IV C C PVC S G+T+ + C ++ I
Sbjct: 1052 QTISQKTLNIVHTGECCA--LASCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNT 1109
Query: 363 SLTMEHDGECQGAKLASLHPCICTREKDPVRGS 461
+LT+++ G+C A IC + ++ R S
Sbjct: 1110 TLTLDYQGKCCPAGCTDELSVICDQHENIYRNS 1142
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 SRLKLKICAGSVFIHKMNKLGILLIAAAHIYSVTALPPPLCICGKIYS--PVCGSDGKTY 175
+R +C F K+NK+ +I AH + A C K P+C + T+
Sbjct: 269 NRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEKKIPICDNRNMTH 328
Query: 176 ENPCEFY---CEKDND 214
C F CE N+
Sbjct: 329 PTLCSFIQYNCEARNN 344
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 38.7 bits (86), Expect = 0.003
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 24/107 (22%)
Frame = +3
Query: 273 CALEYAPVCGSDGKTYAN*CSLECTQKIIP-SLTMEHDGECQGAKLASLH---------- 419
C E+ VCGSDGKTY+N C L+ + ++ ++++ C+ KL
Sbjct: 468 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVG 527
Query: 420 -----PCICT--------REKDPVRGSDGVTYSNLCLLKCASLSKTK 521
C C E V G+DGVTYS+ C +K ++ ++K
Sbjct: 528 ENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Score = 37.9 bits (84), Expect = 0.005
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Frame = +3
Query: 231 IVK-NTACEVGIPCYCALEYAPVCGSDGKTYAN*CSLE---CTQKIIPSLTMEHDGECQG 398
+VK + E P C PVC ++G+T+ N C ++ C K + + ++H G C
Sbjct: 382 VVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGI 439
Query: 399 AKLASLHPC------------------ICTREKDPVRGSDGVTYSNLCLLKCASLSKTK 521
A+ C CT E V GSDG TYSN C L+ A+ K
Sbjct: 440 GVCATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQK 498
Score = 35.5 bits (78), Expect = 0.025
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Frame = +3
Query: 231 IVKNTACEVGIPCYC-ALEYAPVCGSDGKTYAN*CSLE---CTQKIIPSLTMEHDGECQ- 395
++ C P Y ++E +PVC S G Y + C L C K ++T++ G C
Sbjct: 238 LLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLRHHACESKT--NITVKFFGRCDP 295
Query: 396 --GAKLASLHPCI--------------CTREKDPVRGSDGVTYSNLCLLKCASLSKTK 521
G K + C CT V G+DG TY N C LK A+ + K
Sbjct: 296 CHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 353
Score = 34.7 bits (76), Expect = 0.044
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 116 PLCICGKI---YSPVCGSDGKTYENPC 187
P C+C + VCGSDGKTY N C
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNEC 487
Score = 33.1 bits (72), Expect = 0.13
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Frame = +3
Query: 249 CEVGIPCYCALEYAPVCGSDGKTYAN*CSLE---CTQK--IIPSLTMEHDG----ECQGA 401
C P Y E VCG+DG TY++ C ++ C Q ++ + + D +C+
Sbjct: 536 CPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYG 595
Query: 402 KLASLHPCICTRE--KDP-----VRGSDGVTYSNLCLLKCASLSK 515
+ C+C+ +P + G +GV Y +LC L+ AS K
Sbjct: 596 EECRSGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 640
Score = 30.3 bits (65), Expect = 0.94
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCE 190
C + PVC ++G+T++N CE
Sbjct: 397 CEDVMRPVCATNGETFDNECE 417
Score = 30.3 bits (65), Expect = 0.94
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = +2
Query: 77 AAAHIYSVTALPPPLCICGKIYSPVCGSDGKTYENPCEFYCEKDNDTQHYDNREKH 244
A H ++ T P C Y P+CGSDG Y N C N D RE H
Sbjct: 674 ATCHNWACTC---PTCNLSSNY-PICGSDGIVYNNQCHL-----NTISCRDQREIH 720
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3
Query: 450 VRGSDGVTYSNLCLLK 497
V GSDG TYSNLC LK
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 294 VCGSDGKTYAN*CSLE 341
VCGSDG TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 149 VCGSDGKTYENPCE 190
VCGSDG TY N CE
Sbjct: 880 VCGSDGTTYSNLCE 893
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 149 VCGSDGKTYENPC 187
VCG+DGKTY N C
Sbjct: 330 VCGTDGKTYLNEC 342
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 240 NTACEVGIPCYCALEYAPVCGSDGKTYAN*CSL 338
N AC C + Y P+CGSDG Y N C L
Sbjct: 678 NWACTCPT-CNLSSNY-PICGSDGIVYNNQCHL 708
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 273 CALEYAPVCGSDGKTYAN*CSLECTQKII-PSLTMEHDGECQGAKL 407
C E+ VCGSDGKTY+N C L+ + ++ ++++ C+ KL
Sbjct: 476 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKL 521
Score = 37.9 bits (84), Expect = 0.005
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Frame = +3
Query: 231 IVK-NTACEVGIPCYCALEYAPVCGSDGKTYAN*CSLE---CTQKIIPSLTMEHDGECQG 398
+VK + E P C PVC ++G+T+ N C ++ C K + + ++H G C
Sbjct: 390 VVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGI 447
Query: 399 AKLASLHPC------------------ICTREKDPVRGSDGVTYSNLCLLKCASLSKTK 521
A+ C CT E V GSDG TYSN C L+ A+ K
Sbjct: 448 GVCATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQK 506
Score = 35.5 bits (78), Expect = 0.025
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Frame = +3
Query: 231 IVKNTACEVGIPCYC-ALEYAPVCGSDGKTYAN*CSLE---CTQKIIPSLTMEHDGECQ- 395
++ C P Y ++E +PVC S G Y + C L C K ++T++ G C
Sbjct: 246 LLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLRHHACESKT--NITVKFFGRCDP 303
Query: 396 --GAKLASLHPCI--------------CTREKDPVRGSDGVTYSNLCLLKCASLSKTK 521
G K + C CT V G+DG TY N C LK A+ + K
Sbjct: 304 CHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 361
Score = 34.7 bits (76), Expect = 0.044
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 116 PLCICGKI---YSPVCGSDGKTYENPC 187
P C+C + VCGSDGKTY N C
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNEC 495
Score = 33.1 bits (72), Expect = 0.13
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Frame = +3
Query: 249 CEVGIPCYCALEYAPVCGSDGKTYAN*CSLE---CTQK--IIPSLTMEHDG----ECQGA 401
C P Y E VCG+DG TY++ C ++ C Q ++ + + D +C+
Sbjct: 544 CPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYG 603
Query: 402 KLASLHPCICTRE--KDP-----VRGSDGVTYSNLCLLKCASLSK 515
+ C+C+ +P + G +GV Y +LC L+ AS K
Sbjct: 604 EECRSGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 648
Score = 30.3 bits (65), Expect = 0.94
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCE 190
C + PVC ++G+T++N CE
Sbjct: 405 CEDVMRPVCATNGETFDNECE 425
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +2
Query: 149 VCGSDGKTYENPCE---FYCEKDND 214
VCGSDG TY N CE F C+ D
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQID 843
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3
Query: 450 VRGSDGVTYSNLCLLK 497
V GSDG TYSNLC LK
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 294 VCGSDGKTYAN*CSLE 341
VCGSDG TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 149 VCGSDGKTYENPC 187
VCG+DGKTY N C
Sbjct: 338 VCGTDGKTYLNEC 350
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 267 CYCALEYAPVCGSDGK---TYAN*CSLECTQKIIPSLTMEHDGECQGAKLASLHPCICTR 437
C C E PVC +G TY+N C +C Q+ L + ++G C A+ C
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR-------YCNM 77
Query: 438 EKDPVRGSDGVTYSNLC 488
+ PV S+G Y +C
Sbjct: 78 FEQPV-CSEGQMYQTVC 93
Score = 34.3 bits (75), Expect = 0.058
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Frame = +3
Query: 108 CHRRYVFAEKSIVPSAGQMVRRT---RTRVNFTAKRTTTHSTMTIVKNTACEVGIPCYCA 278
C RY + V S GQM + R K H +M + C PC
Sbjct: 70 CSARYCNMFEQPVCSEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEK-CSCTAPC--P 126
Query: 279 LEYAPVCGSDGKTYAN*CSL---ECTQK--IIPSLTMEHDGECQGAKLASLHPCICTREK 443
E+ PVC G+T+AN C+ +C K + SL +++ G C C +
Sbjct: 127 TEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC------CEDMCSAGQTS 180
Query: 444 DPVRGSDGVTYSNLC---LLKCASLSK 515
V S+G T++++C + KC + +
Sbjct: 181 LTVCDSEGNTHTDICSFYIAKCRQMRR 207
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +2
Query: 110 PPPLCICGKIYSPVCGSDGK---TYENPCEFYCEKDN 211
P C C PVC +G TY N C F C ++N
Sbjct: 21 PNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQEN 57
Score = 30.7 bits (66), Expect = 0.71
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 423 CICTREKDPVRGSDG---VTYSNLCLLKCASLSKTKL 524
C C E DPV +G TYSN C+ +CA +K L
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDL 61
Score = 30.3 bits (65), Expect = 0.94
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 119 LCICGKIYSPVCGSDGKTYENPCEFYCEKDNDTQHYDNREKHRMRGGHP 265
+C G+ VC S+G T+ + C FY K + +++ ++ G P
Sbjct: 173 MCSAGQTSLTVCDSEGNTHTDICSFYIAKCRQMRRGIGKKRLQIAGVGP 221
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 31.5 bits (68), Expect = 0.41
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 173 YENPCEFYCEKDNDTQHYDNREKHRMRGGHPLLLCLGICPRLW 301
Y++PC + D HY E+ R+R HP + L P +W
Sbjct: 238 YDSPCHADKKLSRDELHYITTERVRLRPQHPNWMALMKSPVVW 280
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 30.3 bits (65), Expect = 0.94
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 330 CSLECTQKIIPSLTMEHDGECQGAKLASLHPCICTREKDPVRGSDGVTYSNLCLLKCASL 509
C L+ T I + T G LAS HP + D R ++ T+ + L C+ L
Sbjct: 130 CLLD-TPGQIEAFTWSASGSIITDSLASSHPTVVMYIVDSARATNPTTFMSNMLYACSIL 188
Query: 510 SKTKL 524
+TKL
Sbjct: 189 YRTKL 193
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 30.3 bits (65), Expect = 0.94
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 330 CSLECTQKIIPSLTMEHDGECQGAKLASLHPCICTREKDPVRGSDGVTYSNLCLLKCASL 509
C L+ T I + T G LAS HP + D R ++ T+ + L C+ L
Sbjct: 130 CLLD-TPGQIEAFTWSASGSIITDSLASSHPTVVMYIVDSARATNPTTFMSNMLYACSIL 188
Query: 510 SKTKL 524
+TKL
Sbjct: 189 YRTKL 193
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 122 CICGKIYSPVCGSDGK-TYENPCEFYC 199
C C ++PVC D K T+ +PC C
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPCHAGC 475
>Z83237-4|CAB05788.1| 356|Caenorhabditis elegans Hypothetical
protein R06B9.4 protein.
Length = 356
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 150 SAGQMVRRTRTRVNFTAKRTTTHSTMTIVKNTACEVGIPCYCALEY 287
S + ++ T + F+ K T H+ I+K+ C+ G Y +++
Sbjct: 30 STTKNLKATSVEITFSGKTITAHNGKKIIKDKKCKKGEETYVEMKH 75
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 122 CICGKIYS-PVCGSDGKTYENPCEFYCEK 205
C C + PVC +DG Y +PC C +
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPCHAGCRE 556
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/80 (21%), Positives = 29/80 (36%)
Frame = +3
Query: 219 STMTIVKNTACEVGIPCYCALEYAPVCGSDGKTYAN*CSLECTQKIIPSLTMEHDGECQG 398
+T+ + ++C +G C C Y P SD + + P D EC G
Sbjct: 1906 NTIVCIGGSSCLIGT-CLCDSGYEP--SSDRSSCVLNDRYNVRSRSYPKTFCTFDSECTG 1962
Query: 399 AKLASLHPCICTREKDPVRG 458
+ C C + + + G
Sbjct: 1963 GSICIDKRCACRNDHEMING 1982
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 238 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 411
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 238 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 411
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical
protein C30F2.3 protein.
Length = 403
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +3
Query: 219 STMTIVKNTACEVGIPCYCALEYAPVCGSDGKTYAN*CSLECTQKIIPSLTMEHDGECQG 398
S+ T+ C + P +C EY + S + Y + + +I SLT ++G C
Sbjct: 337 SSTTMSPTARCALSDPYWCQ-EYVQIYLSSRQQYQGISTQQSCPSLIASLTESYNGCCTA 395
Query: 399 AKLA 410
+ A
Sbjct: 396 VRAA 399
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 267 CYCALEYAPVCG-SDGKTYAN*CSLECT 347
C+C +E+ PVC + G Y + C CT
Sbjct: 457 CHCKMEWNPVCDRNTGHMYYSACHAGCT 484
>AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical
protein F25E5.10 protein.
Length = 401
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +2
Query: 149 VCGSDGKTYENPCEFYC-EKDNDTQH 223
V GSDG NPC C E+D+D H
Sbjct: 344 VTGSDGTCPGNPCNGLCVEEDDDDIH 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,951,771
Number of Sequences: 27780
Number of extensions: 325718
Number of successful extensions: 933
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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