Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O04
         (543 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              31   0.006
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   3.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 31.5 bits (68), Expect = 0.006
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 128 CGKIYSPVCGSDGKTYENPCEFY 196
           C + + PVC S+GK Y N CE +
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH 132



 Score = 31.5 bits (68), Expect = 0.006
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 273 CALEYAPVCGSDGKTYAN*CSL 338
           C   + PVC S+GK YAN C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131



 Score = 25.8 bits (54), Expect = 0.29
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
 Frame = +3

Query: 387 ECQGAKLASLHPCICTRE----KDPVRGSDGVTYSNLCLL---KC---ASLSKTKLEHRT 536
           EC+ +  +++  C+C R+      PV  S+G  Y+N C L    C   +SL+K++L    
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAACHSGSSLTKSRLMRCL 151

Query: 537 H 539
           H
Sbjct: 152 H 152


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 526 SSLVLDSDAHFKRHR 482
           SSL+ D++ HF++HR
Sbjct: 718 SSLLSDTEQHFRQHR 732


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 463 SLPRTGSFSRVHIHGCKL 410
           S  R  S   +H+HGCK+
Sbjct: 87  SWQRLTSLHELHVHGCKV 104


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 540 GVFDAQAWSWTVTR 499
           GVF   AWSW   R
Sbjct: 166 GVFGGSAWSWREER 179


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 540 GVFDAQAWSWTVTR 499
           GVF   AWSW   R
Sbjct: 166 GVFGGSAWSWREER 179


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +2

Query: 128 CGKIYSPVCGSDGKTYENPCEFYCEKDNDTQH 223
           C   Y      DG +Y N  E  C +D   ++
Sbjct: 230 CHSRYEDSRHEDGNSYRNDGERSCSRDRSREY 261


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 165 VRRTRTRVNFTAKRTTTHSTMTIVKNTACEV 257
           +RR  T  + + K+ ++  T +I K T CE+
Sbjct: 771 IRRKVTMGDKSKKQGSSAGTSSITKYTGCEL 801


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 131 RKYITAVAELLPSIYAQRRSEEYRVYSFCV 42
           RK  T    ++ S   Q++SEE  +   CV
Sbjct: 795 RKTATTTQPVISSRKEQKKSEEKNINDHCV 824


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 165 VRRTRTRVNFTAKRTTTHSTMTIVKNTACEV 257
           +RR  T  + + K+ ++  T +I K T CE+
Sbjct: 861 IRRKVTMGDKSKKQGSSAGTSSITKYTGCEL 891


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 114 RRYVFAEKSIVPSAGQM 164
           RR +FA + ++ SAG +
Sbjct: 308 RRIIFARREVILSAGSV 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,117
Number of Sequences: 438
Number of extensions: 3908
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)