Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_O03
(560 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 203 2e-53
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 203 2e-53
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 95 8e-21
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 90 2e-19
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 33 0.029
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 29 0.47
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.62
SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 29 0.62
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 28 0.82
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 28 1.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 1.9
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 26 4.4
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 203 bits (495), Expect = 2e-53
Identities = 96/188 (51%), Positives = 129/188 (68%), Gaps = 4/188 (2%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGAL QTETVLRQA+ ERI+P++ +NK+DRA YQ F R+V
Sbjct: 123 DGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVV 182
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFKIDLVKL 362
E+VNV+I+TY D +G+ +V P KG+V F SGLHGWAFT++QF+ YA F ID K+
Sbjct: 183 ESVNVVISTYYDKV--LGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKKFGIDRNKM 240
Query: 363 MNRLWGENFFNANTKKWAKQ----KDNENKRSFCMYVLDPIYKVFDAIMNFKKEEIDSLL 530
M RLWGEN+FN TKKW+K N N+R+F M++LDPIY++FDA+MN +K+E+ +LL
Sbjct: 241 MQRLWGENYFNPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSRKDEVFTLL 300
Query: 531 KKIGVTLK 554
K+ VT+K
Sbjct: 301 SKLEVTIK 308
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 203 bits (495), Expect = 2e-53
Identities = 96/188 (51%), Positives = 129/188 (68%), Gaps = 4/188 (2%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGAL QTETVLRQA+ ERI+P++ +NK+DRA YQ F R+V
Sbjct: 123 DGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVV 182
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFKIDLVKL 362
E+VNV+I+TY D +G+ +V P KG+V F SGLHGWAFT++QF+ YA F ID K+
Sbjct: 183 ESVNVVISTYYDKV--LGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKKFGIDRNKM 240
Query: 363 MNRLWGENFFNANTKKWAKQ----KDNENKRSFCMYVLDPIYKVFDAIMNFKKEEIDSLL 530
M RLWGEN+FN TKKW+K N N+R+F M++LDPIY++FDA+MN +K+E+ +LL
Sbjct: 241 MQRLWGENYFNPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSRKDEVFTLL 300
Query: 531 KKIGVTLK 554
K+ VT+K
Sbjct: 301 SKLEVTIK 308
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 94.7 bits (225), Expect = 8e-21
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 14/195 (7%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGA QT TVLRQA +RIK IL +NKMDR + R+V
Sbjct: 119 DGAFVLVDAVEGVCSQTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLV 178
Query: 183 ENVNVIIATY--------SDDSGPMGE--VRVDPSKGSVGFGSGLHGWAFTLKQFSEMYA 332
E VN +I T+ +D+ + + + P +G+V F S GWAF L QFSE Y
Sbjct: 179 EQVNAVIGTFYTGELMQLADNDEVISDEGIYFAPEQGNVVFASAYDGWAFCLDQFSEFYE 238
Query: 333 DXFKIDLVKLMNRLWGENFFNANTKKWAKQKDNENKR---SFCMYVLDPIYKVFD-AIMN 500
+ L LWG+ + + TK+ + K + +R F +VL+ ++ V++ A+ N
Sbjct: 239 KKLGLKQKALTKCLWGDYYLDPKTKRVLQPKHLQGRRLKPMFVQFVLENLWAVYESAVSN 298
Query: 501 FKKEEIDSLLKKIGV 545
E I+ ++K + +
Sbjct: 299 RNLENIEKIIKALNI 313
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 89.8 bits (213), Expect = 2e-19
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DG + T +++ AI + +L +NK+DR Y + ++
Sbjct: 234 DGVVLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVI 293
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFK-IDLVK 359
+ VN I S D + RV P G+V F S G+ FTL F+++Y D ID+
Sbjct: 294 DEVNDNICQISKDL----KYRVSPELGNVCFASCDLGYCFTLSSFAKLYIDRHGGIDVDL 349
Query: 360 LMNRLWGENFFNANTKKWAKQK-DNENKRSFCMYVLDPIYKVFDAIMNFKKEEIDSLLKK 536
RLWG+ +F++ T+K+AKQ D RSF ++L+P+YK+ ++ + E++ L
Sbjct: 350 FSKRLWGDIYFDSKTRKFAKQSLDGSGVRSFVHFILEPLYKLHTLTISDEAEKLKKHLSS 409
Query: 537 IGVTLK 554
+ LK
Sbjct: 410 FQIYLK 415
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 33.1 bits (72), Expect = 0.029
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXY 161
DGA+ QT+ V +QA I ++F+NKMDR Y
Sbjct: 118 DGAVAIIDGSAGVEAQTKVVWKQATKRGIPKVIFVNKMDRVGSSLGSTIRSIY 170
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 29.1 bits (62), Expect = 0.47
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 381 ENFFNANTKKWAKQKDNENKRSFCMYVLDPIYKVFDAIMNFKKEEIDSLLKKIGVTLK 554
+++ +A+ K K+K ++NK++ +LDPI + EI L K +G+ K
Sbjct: 72 DDYLDAHRKSSTKKKSSQNKQAKESKLLDPIAFQHKIALEEDDREIAHLEKMLGIKSK 129
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.7 bits (61), Expect = 0.62
Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 5/170 (2%)
Frame = +1
Query: 64 CVRQSPSASSLFCS*TKWTEPYLSSS*SLK---NSTRXXXXXXXXXXXXXXXXXMTAVLW 234
C P SL C + YL+ + L+ +S+ T
Sbjct: 95 CTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTS 154
Query: 235 VRSASTQARGQSVSDLVSTVGRLHSNXXXXXXXXXXXXXXXXX*TDCGERTSSMPTQRNG 414
S+S+ + S S S+ S+ + +SS+P +
Sbjct: 155 PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSST 214
Query: 415 PSRRITRTSVHSACTSWTR--STKSLMQL*TSRKRRLTVC*RKSESHSST 558
S + +S S+ +S +R S+ S + +S TV S S SST
Sbjct: 215 SSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSST 264
>SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 28.7 bits (61), Expect = 0.62
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 297 AFTLKQFSEMYADXFKIDLVKLMNRLWGENFFN 395
A+ + + E Y D K ++K +W FFN
Sbjct: 153 AYVISYYVEKYVDKAKFPIIKGFIEMWNRKFFN 185
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 28.3 bits (60), Expect = 0.82
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 300 FTLKQFS-EMYADXFKIDLVKLMNRLWGENFFNANTKKWAKQKDNE 434
FT+ + + E Y+ ++ + ++L+NRL ++F + T KW K ++
Sbjct: 620 FTVLEIAAEEYSPNWESEELRLVNRLDVDSFLHPKTPKWVFNKQDQ 665
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 122
DGA+ QT TV RQ + I F+NKMDR
Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 310 LSVNAQPWRPD--PKPTDPLLGSTRTSPIGPL 221
LS N P RPD P P PLL S SP+ P+
Sbjct: 1046 LSRNNSP-RPDFLPLPNQPLLHSNLHSPVSPV 1076
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 382 RTSSMPTQRNGPSRRITRTSVHSACTS 462
+T++MP N PSR ++ TS A S
Sbjct: 103 QTTAMPPPSNNPSRHVSSTSNKPAAVS 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,167,968
Number of Sequences: 5004
Number of extensions: 40828
Number of successful extensions: 125
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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