Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_O03
(560 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 182 2e-46
02_04_0017 + 18937774-18937864,18938505-18940945 181 3e-46
04_01_0103 + 1082077-1082167,1083037-1085477 181 4e-46
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 173 1e-43
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 130 6e-31
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 110 8e-25
02_04_0148 - 20198407-20201424 65 4e-11
03_05_0511 + 25056018-25059107 64 6e-11
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062... 31 0.63
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 30 1.1
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371 29 2.5
06_03_0637 - 22995831-22996667,22997200-22997694 29 2.5
08_02_0092 + 12265446-12265809,12266147-12266743,12266792-122668... 28 5.9
06_03_0236 - 18568719-18569081 27 7.7
03_06_0490 + 34289904-34289967,34291912-34292237,34292401-342925... 27 7.7
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 182 bits (443), Expect = 2e-46
Identities = 87/186 (46%), Positives = 120/186 (64%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGAL QTETVLRQA+ ERI+P+L +NKMDR YQTF R++
Sbjct: 123 DGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAYQTFSRVI 182
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFKIDLVKL 362
EN NVI+ATY D +G+V+V P KG+V F +GLHGWAFTL F++MYA F +D K+
Sbjct: 183 ENANVIMATYED--ALLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASKFGVDESKM 240
Query: 363 MNRLWGENFFNANTKKWAKQKDNEN--KRSFCMYVLDPIYKVFDAIMNFKKEEIDSLLKK 536
M RLWGEN+F+ TKKW + + KR F + +PI ++ + MN +K+++ +L+K
Sbjct: 241 MERLWGENYFDPTTKKWTIKHTGSDTCKRGFIQFCYEPIRQIINTCMNDQKDKLLPMLQK 300
Query: 537 IGVTLK 554
+GVT+K
Sbjct: 301 LGVTMK 306
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 181 bits (441), Expect = 3e-46
Identities = 87/186 (46%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGAL QTETVLRQA+ ERI+P+L +NKMDR YQTF R++
Sbjct: 123 DGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRVI 182
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFKIDLVKL 362
EN NVI+ATY D +G+V+V P KG+V F +GLHGWAFTL F++MYA F +D K+
Sbjct: 183 ENANVIMATYEDTL--LGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDEFKM 240
Query: 363 MNRLWGENFFNANTKKWAKQKDNEN--KRSFCMYVLDPIYKVFDAIMNFKKEEIDSLLKK 536
M RLWGENFF+ TKKW + KR F + +PI ++ + MN +K+++ +L+K
Sbjct: 241 MERLWGENFFDPATKKWTNKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 537 IGVTLK 554
+GV +K
Sbjct: 301 LGVVMK 306
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 181 bits (440), Expect = 4e-46
Identities = 87/186 (46%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGAL QTETVLRQA+ ERI+P+L +NKMDR YQTF R++
Sbjct: 123 DGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRVI 182
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFKIDLVKL 362
EN NVI+ATY D +G+V+V P KG+V F +GLHGWAFTL F++MYA F +D K+
Sbjct: 183 ENANVIMATYEDTL--LGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDESKM 240
Query: 363 MNRLWGENFFNANTKKWAKQKDNEN--KRSFCMYVLDPIYKVFDAIMNFKKEEIDSLLKK 536
M RLWGENFF+ TKKW + KR F + +PI ++ + MN +K+++ +L+K
Sbjct: 241 MERLWGENFFDPATKKWTNKSTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 537 IGVTLK 554
+GV +K
Sbjct: 301 LGVVMK 306
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 173 bits (420), Expect = 1e-43
Identities = 85/190 (44%), Positives = 115/190 (60%), Gaps = 4/190 (2%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGAL QTETVLRQ++AERIKP+L +NKMDR YQ F R++
Sbjct: 123 DGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQQSGEEAYQAFSRVI 182
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFKIDLVKL 362
E+VNV +A Y D + +G+ V P KG+V F +GLHGWAFTL F++MY FK+D K+
Sbjct: 183 ESVNVTMAPYEDKN--LGDCMVAPEKGTVAFSAGLHGWAFTLSNFAKMYKAKFKVDEAKM 240
Query: 363 MNRLWGENFFNANTKKWAKQKDNEN----KRSFCMYVLDPIYKVFDAIMNFKKEEIDSLL 530
M RLWGEN+F+ TKKW + + +R F + +PI ++ A MN KE + +L
Sbjct: 241 MERLWGENYFDHTTKKWTTTAPSTSSKTCQRGFVQFCYEPIRRIISACMNDDKENLWDML 300
Query: 531 KKIGVTLKHE 560
K+ +TLK E
Sbjct: 301 TKLKITLKAE 310
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 130 bits (315), Expect = 6e-31
Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGAL T+T +R+A+ +I+P+ +NK+DR YQT ++
Sbjct: 309 DGALVVVDSFEGVTLWTKTSIREALNMKIQPVFTLNKIDRFFLEQNVDGEKAYQTLSSLI 368
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADXFKIDLVKL 362
++VN ++++ D +V P+KG+V F SGLHGWA + F++MY+ FK++ K+
Sbjct: 369 DSVNATMSSHKD-------AQVYPTKGTVVFSSGLHGWAVAISNFAKMYSSKFKVEESKM 421
Query: 363 MNRLWGENFFNANTKKWAKQKDNEN--KRSFCMYVLDPIYKVFDAIMNFKKEEIDSLLKK 536
++RLWGENFF+ TKKW K+ KR F + +PI ++ +A MN K ++ +L+K
Sbjct: 422 IDRLWGENFFDLATKKWTKKNTGTATCKRGFVQFCYEPIREIMNACMN-SKHKLWPMLEK 480
Query: 537 IGVTL 551
I VT+
Sbjct: 481 IHVTV 485
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 110 bits (264), Expect = 8e-25
Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 3/188 (1%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
DGA+ TE +R A ER+ ++ +NK+DR Y + +
Sbjct: 244 DGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVINKVDRLITELKLPPNDAYFKLRHTL 303
Query: 183 ENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMY--ADXFKIDLV 356
E +N +I++ S G G VDP+ G+V F SG GW+FTL+ F+ +Y + D
Sbjct: 304 EAINDLISSCSTTVG--GTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKIHGIQFDHE 361
Query: 357 KLMNRLWGENFFNANTKKWAKQKDNEN-KRSFCMYVLDPIYKVFDAIMNFKKEEIDSLLK 533
K +RLWG+ +++ +T+ + K+ E RSF +VL+P+YK++ ++ K ++++ L
Sbjct: 362 KFASRLWGDLYYHPDTRTFKKKPPKEGANRSFVEFVLEPLYKIYSQVVGESKGKVEATLS 421
Query: 534 KIGVTLKH 557
++GVTL +
Sbjct: 422 ELGVTLSN 429
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 64.9 bits (151), Expect = 4e-11
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 28/186 (15%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRIV 182
D AL QT LRQA ER++P L +NK+DR + +RIV
Sbjct: 112 DSALVLVDAAEGVRVQTHAALRQAFVERLRPCLVLNKVDRLVAELRLTPAEAHARLRRIV 171
Query: 183 ENVNVIIATYSD------------------DSGPMGEVRVD---PSKGSVGFGSGLHGWA 299
VN I + D+G + D P G+V F GW
Sbjct: 172 SEVNSIYSALRSRSYFSTLDAACALSQELPDNGDAADEEEDAFQPQNGNVVFACAREGWG 231
Query: 300 FTLKQFSEMYADXFKIDLVKLMNRLWGENFFNANTK------KWAKQKDNEN-KRSFCMY 458
F L +++ A + D +L+ LWG+ +F+ ++ A N N K F Y
Sbjct: 232 FRLVTLAKLLAPKLRADPAELLKGLWGQKYFDERSRTVVGKEAMAAATANPNPKPMFVKY 291
Query: 459 VLDPIY 476
VL+P++
Sbjct: 292 VLEPLW 297
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 64.5 bits (150), Expect = 6e-11
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 31/215 (14%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRAXXXXXXXXXXXYQTFQRI- 179
D AL QT LRQA ER++P L +NK+DR Y RI
Sbjct: 100 DSALILVDAVEGVHIQTHAALRQAFLERLRPCLVLNKLDRLISELHLTPAEAYTRLHRII 159
Query: 180 --VENVNVIIATYS------------------------DDSGPMGEVRVDPSKGSVGFGS 281
V +++ + ++S +D E P KG+V F
Sbjct: 160 SDVNSIHSALRSHSYFSLLSSLEDQPSSASSSSPDELPEDVDEDEEDAFQPQKGNVVFAC 219
Query: 282 GLHGWAFTLKQFSEMYADXF-KIDLVKLMNRLWGENFFNANTKKWAKQKDNEN---KRSF 449
L GW F + QF+E YA I+ L+ LWG +F+ K +K E + F
Sbjct: 220 ALDGWGFRIHQFAEFYAAKLPNINANALLKGLWGPRYFHKKKKMIVGKKGMEGGDAQPMF 279
Query: 450 CMYVLDPIYKVFDAIMNFKKEEIDSLLKKIGVTLK 554
+VL P+++ + +++ E + ++ + ++
Sbjct: 280 VEFVLKPLWQAYQGVLSENGELVKKVITNFSLQVQ 314
>04_04_0294 +
24204563-24204748,24205531-24205620,24205980-24206211,
24207180-24207457,24207576-24207647,24208054-24208295,
24208781-24209197,24209296-24209497,24209624-24209738,
24209821-24209906,24210235-24210354,24210431-24210519,
24210588-24210669,24211072-24211263,24211546-24211668
Length = 841
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 325 ISENCLSVNAQPWRPDPKPTDPLLGS 248
I E +NA+ W PDP DPL GS
Sbjct: 495 IDEKQAWLNAESWEPDPVEADPLKGS 520
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 3 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 122
+GA+ QT+ VL +A+ ++PIL +NK+DR
Sbjct: 148 EGAVLVVDAGEGPLAQTKFVLSKALKYGLRPILLLNKVDR 187
>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
Length = 437
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 399 NTKKWAKQKDNENKRSFCMYVLDPIYKV 482
N +KW +D E ++ C LDP +KV
Sbjct: 40 NKRKWTADEDEELVKALCEVSLDPRFKV 67
>06_03_0637 - 22995831-22996667,22997200-22997694
Length = 443
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1
Query: 299 RPTVETRSETD*PLAWVDADLTHRTAV 219
RP+ T SET PLAWVD THR V
Sbjct: 15 RPSAATPSETL-PLAWVDRYPTHRGLV 40
>08_02_0092 +
12265446-12265809,12266147-12266743,12266792-12266861,
12267325-12267427
Length = 377
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 298 AQPWRPDPKPTDPLLGSTRTSPIGPLSSE*VAMMTLTFSTIR 173
A+ +R P PT P + PI P + +A M + ST+R
Sbjct: 77 AKFYREPPPPTSPAPPQCPSRPIPPFAGPSIAAMAVPSSTLR 118
>06_03_0236 - 18568719-18569081
Length = 120
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +2
Query: 5 WSSCCGGLCLWCVRTNRDRAASGNRRAHQAYSVH 106
W CC C WC+ SG R + + VH
Sbjct: 2 WGVCC---CFWCLGLGNKEEWSGGVRERERWLVH 32
>03_06_0490 +
34289904-34289967,34291912-34292237,34292401-34292536,
34292651-34292793,34292880-34293003,34293562-34293963,
34294121-34294176
Length = 416
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 177 IVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGW 296
I+++ NV I ++SD R D G GFGS GW
Sbjct: 57 ILQSANVKIFSFSDLRIATRNFRPDSVLGEGGFGSVYKGW 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,591,345
Number of Sequences: 37544
Number of extensions: 281086
Number of successful extensions: 848
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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