Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O01
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.8  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 611 NGGCSSFLDICCPVS 655
           +GGCSS +D+  PV+
Sbjct: 925 DGGCSSLVDVSTPVN 939


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 240 LKMLFISSRSISLAFAWA*AEPTSTRIANILYIFLQCV 127
           +K+ +IS   IS+ FA   A PT   +A I      CV
Sbjct: 184 IKVYYISCPEISVNFAHFPATPTGREVALIEQTIGTCV 221


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 203 NDIDLEEINSIFKIPNQA 256
           ND+DLE+   I   P+QA
Sbjct: 306 NDLDLEKYEGISSTPSQA 323


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 242 IPNQAPTTTKKPTMTVSAPSA 304
           +P+++PT T  PTM   A +A
Sbjct: 595 VPSKSPTLTHSPTMYGDALNA 615


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,140
Number of Sequences: 438
Number of extensions: 4662
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)