Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_N21
(542 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 0.34
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 29 0.59
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 29 0.59
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 28 0.77
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 1.4
SPBC713.03 |||D-lactate dehydrogenase |Schizosaccharomyces pombe... 27 2.4
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 27 2.4
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 3.1
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 26 3.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.1
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 25 5.5
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 25 5.5
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 25 5.5
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 25 5.5
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 25 5.5
SPAC23C11.17 |||mitochondrial inner membrane protein involved in... 25 7.2
SPAC2F7.05c |||translation initiation factor eIF5 |Schizosacchar... 25 9.5
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 25 9.5
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 25 9.5
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 25 9.5
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 25 9.5
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 25 9.5
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 29.5 bits (63), Expect = 0.34
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -3
Query: 327 WLCYMWHSWRTSPVLXRRGSGRAVRTGSRRSWISRHLKRKRHLPY 193
W+ Y+WH + G G+ V+T + S+++ L ++H P+
Sbjct: 385 WMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL--RQHGPF 427
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 28.7 bits (61), Expect = 0.59
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 262 SSSYWLS-SKLDKSALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLG-LFSGXSTPG 89
SS Y L+ SK DK+A+ T + EH +F D TPLG + + S
Sbjct: 1438 SSGYTLNNSKFDKAAVSK--TLSAQDVSRLQKVSCGEHLYFGTDVFTPLGDMATSASMFS 1495
Query: 88 MQDPPKKSAKF 56
+ D +K+ F
Sbjct: 1496 LDDSSEKTDAF 1506
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.7 bits (61), Expect = 0.59
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 78 GSCIPGVDXPENNP---NGVDVSKLKKQCSSDNSPWKCLQEDRGDVAFVSSADLSNFDES 248
GS + G + N+P NG V+ KQ + N+ ++C D+ D+ FV + L+N +
Sbjct: 105 GSELKGEES-HNSPGTLNGTSVANASKQPNMPNATFRC---DKCDMMFVKQSGLTNHKRT 160
Query: 249 QYEL 260
+++
Sbjct: 161 YHQV 164
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 28.3 bits (60), Expect = 0.77
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 327 WLCYMWHSWRTSPVLXRRGSGRAVRTGSRRSWISRHLKRKRHLPY 193
W+ Y+WH + G G+ V+T S++ L K+H P+
Sbjct: 400 WMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL--KQHGPF 442
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 225 DLSNFDESQYELLCLNRDAXGRDSFSNYATCNIAMSPSRTWLSAKDFL---SDVSIAHTP 395
+++ F + + + R R SN ++ N+A +PS T D L S + H+P
Sbjct: 225 EMNGFSKKRDNVNIPKRTYSARSIPSNISSTNVATTPSNTIFEMDDTLKADSSSNEYHSP 284
Query: 396 LSLAQLLDTRSDLFN 440
+ T +DL N
Sbjct: 285 TNTLPSYHTEADLDN 299
>SPBC713.03 |||D-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 98 DAGYARPSEEIGQVFDAFTGVDGFFID 18
D YA+ SE+ QVF + G DG ID
Sbjct: 45 DPKYAKLSEQDVQVFKSIIGKDGSLID 71
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 26.6 bits (56), Expect = 2.4
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -2
Query: 382 IETSERKSLADNQVLDGDMAMLHVA*LENESRPXASRFRQSSSYWLSSKLDKSALETKAT 203
+ETSE +N VL + L +EN S P S S+ + AL+TKA
Sbjct: 486 VETSELSDSDENSVLSNKSSTLSKKVVENTS-PLKYTHSASKSFIGEVQDSLQALKTKAH 544
Query: 202 SPLS 191
P S
Sbjct: 545 KPRS 548
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 150 QCSSDNSPWKCLQEDRGDVAFVSSADLSNFDESQYELLCLN 272
+C + + WKC+Q G +V S ++ D + + CL+
Sbjct: 123 KCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLD 163
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 75 GGSCIPGVDX-PENNPNGVDVSKLKKQCSSDNSPWKCLQEDRG 200
G SC D P P+ S+ KK C S P C QE +G
Sbjct: 222 GSSCCSKKDSSPSEKPSCC--SQEKKSCCSSKKPSCCSQEKKG 262
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 4.1
Identities = 19/103 (18%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +1
Query: 4 LSTTLSIKKPSTPVNASKTWPISSEGLAYPASXNQKIIPTALMYRN*RNSVQVITARGSV 183
+++T + STP+ ++ + +S P+ ++PT+ + +S TA +
Sbjct: 378 VNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSAS 437
Query: 184 CKRIGEM--SLSFQVPTYPTSTRASTNCSA*TATPEDGTRSPT 306
+ + + + + P S+ ST ++ ++TP S T
Sbjct: 438 STPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTT 480
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 25.4 bits (53), Expect = 5.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -2
Query: 169 LLSLEHCFFSFDTSTPLGLFSGXSTPGMQDPPKKSAKFLTHSPVLMA 29
LL+L C F F PL T ++D P +S + S VL++
Sbjct: 228 LLALGWCLFLFIAIKPLVYLLAVKTRSLKDKPSESFICIVLSMVLVS 274
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 93 GVDXPENNPNGVD-VSKLKK-QCSSDNSPWKCLQEDRGDVAFVSSADLSNFDESQYELLC 266
G++ + + +G++ +S+L + +C S W+ LQ R V + FDE E+
Sbjct: 243 GLEGRDMSTSGINQLSRLARVECEHHASAWQQLQARRAYVKMELKRVTTEFDEKSVEISR 302
Query: 267 LNR 275
L +
Sbjct: 303 LEK 305
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 226 TYPTSTRASTNCSA*TAT---PEDGTRSPTMPHVT*PCLHLELGCPPRISFPTSQS 384
T P S + T C T P SPT + C H++L R+ P S S
Sbjct: 150 TNPRSEQPHTPCKKGTKIKLKPPQSPLSPTTSLLARKCKHIDLDTFSRLDHPNSDS 205
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 108 ENNPNGVDVSKLKKQCSSDN-SPWKCLQEDRGDVAFVSSADLSNFDESQYELL 263
++N V V + K +++ S WKCL + D + S D ++ DE +LL
Sbjct: 923 KSNSKKVTVLRNKLNILNNSLSKWKCLIKKPSDFSEPVSMDFTSNDEQLVQLL 975
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/35 (25%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Frame = +3
Query: 108 ENNPNGVDVSK------LKKQCSSDNSPWKCLQED 194
++NPN ++++K ++ +CS++ + WK Q++
Sbjct: 28 KDNPNNINIAKNLLNNNIQARCSTNEASWKLAQKE 62
>SPAC23C11.17 |||mitochondrial inner membrane protein involved in
potassium ion transport|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 405 AQLLDTRSDLFNIYGEFLKNNNVXFSNDATGLATTEKLDFEKF 533
AQL TR+++ N+ LK+ FSN+ T E +F F
Sbjct: 216 AQLRKTRNEVSNMLRSTLKSGKFTFSNE-----TRESKEFRDF 253
>SPAC2F7.05c |||translation initiation factor eIF5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -2
Query: 388 WAIETSERKSLADNQVLDGDMA-MLHVA*LE-NESRPXASRFRQSSSYWL 245
WA++TSE A Q L+G+M L ++ L +E +SR+ Q WL
Sbjct: 194 WAVDTSEEAVRARVQELEGNMKDSLTLSDLRGDEEEAESSRYDQFGE-WL 242
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 348 LSAKDFLSDVSIAHTPLSLAQLLDTRSDLFNIYGEFLKN-NNVXFS 482
LS + ++ ++ T S + +D +D NI+ F+ N NN FS
Sbjct: 56 LSGPSPIRNIQLSATKSSESNSIDYLTDTQNIFPNFVNNENNYQFS 101
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 160 LEHCFFSFDTSTPLGLFS 107
+EH F +T TP+ LFS
Sbjct: 692 IEHADFLLETKTPMNLFS 709
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 298 NESRPXASRFRQSSSYWLSSKLDKSAL 218
N+ RP ASR R S+Y SS + +L
Sbjct: 296 NQRRPSASRVRSFSNYVKSSNVVNPSL 322
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 235 LDKSALETKATSPLSSCKHFHGLLSLEHCFFS 140
L + + +AT+P+SS +HF L + F S
Sbjct: 57 LSEMSKRVQATAPISSLEHFKQLSDISPSFTS 88
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/49 (20%), Positives = 25/49 (51%)
Frame = -1
Query: 314 CGIVGERVPSSGVAVQAEQFVLALVEVG*VGT*NESDISPILLQTLPRA 168
C ++ + + V ++ +L + ++G +E++I+P L+ RA
Sbjct: 280 CNVIHSDIKPDNMLVNEKRNILKICDLGSASDASENEITPYLVSRFYRA 328
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,319,865
Number of Sequences: 5004
Number of extensions: 49097
Number of successful extensions: 180
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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