Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_N21
(542 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 36 0.028
03_02_0215 + 6505231-6505554,6506786-6507682 34 0.084
04_04_1355 + 32851514-32851696,32852132-32852224,32852334-328524... 32 0.26
04_04_1127 - 31098233-31098326,31099968-31100047,31100198-311003... 31 0.79
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 29 2.4
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304... 29 3.2
07_03_0216 + 15286968-15286970,15287068-15287213,15288333-152883... 28 4.2
11_06_0265 - 21788531-21789798,21789914-21789947 28 5.5
07_03_0710 - 20873420-20874745 28 5.5
12_01_0836 - 7801155-7801454,7801850-7801914,7802237-7802562,780... 27 7.3
03_05_1016 + 29726949-29727503,29728863-29729504 27 7.3
02_02_0712 + 13200174-13200761,13201966-13202616 27 7.3
09_04_0489 - 18031187-18031579,18032033-18034030,18034102-180342... 27 9.7
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 27 9.7
07_03_0506 - 18861787-18861917,18862017-18862201,18862542-188626... 27 9.7
03_06_0674 - 35449373-35449465,35449959-35450112,35450763-354508... 27 9.7
03_05_1100 - 30404224-30405018,30405100-30405435 27 9.7
02_05_1044 + 33728623-33728768,33728814-33728993,33729446-337295... 27 9.7
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 35.5 bits (78), Expect = 0.028
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +1
Query: 7 STTLSIKKPSTPVNASKTWPISSEGLAYPASXNQKIIPTALMYRN*RNSVQVITARGSVC 186
+T+ +PSTP + S+ P SS G A PA + R+ +++ + GS
Sbjct: 174 TTSAQNSRPSTPTSRSRAMPNSSSG-AIPAMSRPGASTISATSRSNASTISATSRPGSSS 232
Query: 187 KRIGEMS--LSFQVPTYPTSTRASTNCSA*TATPEDGTRSPTM 309
+ +S S T P+ +R+S+ S T P + +P +
Sbjct: 233 SNVPGISRATSLSSSTVPSMSRSSSRSSTPTRQPAMRSSAPAV 275
>03_02_0215 + 6505231-6505554,6506786-6507682
Length = 406
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -3
Query: 249 GSRRSWISRHLKRKRHLPYPLANTSTGCYHLNTVSSVSIHQRRWDY----FLVXRRRVCK 82
GS W S +R H + +N ++ LNT +H RW++ F++ ++ + K
Sbjct: 75 GSFVIWDSHAFERDLHRHFKHSNFTSFIRQLNTYGFRKVHPDRWEWANEGFIMGQKHLLK 134
Query: 81 TLRRNRPS 58
T++R + S
Sbjct: 135 TIKRRKKS 142
>04_04_1355 +
32851514-32851696,32852132-32852224,32852334-32852485,
32852702-32852837,32852947-32853102,32853233-32853312,
32853475-32853568
Length = 297
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 228 LSNFDESQYELL-CLNRDAXGRDSFSNYATCNIAMSPSRTWLSAKDFLSDVSIAHTPLSL 404
+ NF++++ LL LN+DA ++ +N C++ + SA +L+ + +AH L
Sbjct: 224 MGNFEDAEGLLLESLNKDAKDAETLANLVVCSLNLGK-----SASRYLNQLKLAHPDHML 278
Query: 405 AQLLDTRSDLFN 440
+ + + D F+
Sbjct: 279 VKRMSSAEDSFD 290
>04_04_1127 -
31098233-31098326,31099968-31100047,31100198-31100353,
31100481-31100616,31101195-31101346,31102307-31102390,
31102495-31102656
Length = 287
Score = 30.7 bits (66), Expect = 0.79
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 228 LSNFDESQYELL-CLNRDAXGRDSFSNYATCNIAM-SPSRTWLS 353
+ +FDE++ LL LN+DA ++ +N CN+ + PS +LS
Sbjct: 214 MGSFDEAETLLLEALNKDAKDPETLANLIVCNLHLGKPSSRYLS 257
>07_03_1486 +
26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 199 EMSLSFQVPTYPTSTRASTNCSA*TATPEDGTRSPTMP 312
E LSF P PTS R +T+ + + +P+ G + ++P
Sbjct: 834 EFGLSFPGPVSPTSGRQTTSLYSGSFSPKAGNKQSSLP 871
>01_06_0486 -
29729333-29729356,29729856-29730106,29730364-29730466,
29730571-29730663,29730773-29730905,29731184-29731272,
29731385-29731553,29731930-29732016,29732388-29732506,
29732554-29732706
Length = 406
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -3
Query: 330 TWLCYMWHSWRTSPVLXRRGSGRAVRTGSRRSWISRHLKRKRHLPYP 190
TWL + H+ V R + G RSW+ + + R LP P
Sbjct: 102 TWLIWKEHNESLRGVQSLRNTAPVAEKGKLRSWVGPNGQYYRELPCP 148
>07_03_0216 +
15286968-15286970,15287068-15287213,15288333-15288335,
15288514-15288697,15289772-15289824,15290118-15290206,
15291270-15291506,15293494-15293687,15293774-15293834,
15293905-15294022,15294093-15294174,15295212-15295337,
15295435-15295530,15295945-15296099,15296706-15296802,
15296926-15297003,15297085-15297192
Length = 609
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 83 RPSEEIGQVFDAFTGVDGFFIDKVVE 6
+P E + V DA G GFF+DKV++
Sbjct: 283 KPLEGLHIVVDAGNGAGGFFVDKVLK 308
>11_06_0265 - 21788531-21789798,21789914-21789947
Length = 433
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 150 QCSSDNSPWKCLQEDR--GDVAFVSSADLSNFDESQYE 257
+ S +++PWK +++ G+ F+SS+ +F SQYE
Sbjct: 333 ELSFNSNPWKWIEKKSLDGESIFISSSCNKSFAASQYE 370
>07_03_0710 - 20873420-20874745
Length = 441
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 351 SAKDFLSDVSIAHTPLSLAQLLDTRSDL 434
S +L D++I PL L +LDT SDL
Sbjct: 88 STATYLVDIAIGTPPLPLTAVLDTGSDL 115
>12_01_0836 -
7801155-7801454,7801850-7801914,7802237-7802562,
7805936-7806372
Length = 375
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 365 EILGGQPSSRWRHGYVTCGIVGERVPSSGVAVQAEQFVLAL 243
E+LGG S + G+V E + ++G AV AE+ L
Sbjct: 29 ELLGGSVVSMTLKAAIELGLVDELLAAAGAAVTAEELAARL 69
>03_05_1016 + 29726949-29727503,29728863-29729504
Length = 398
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 1 HLSTTLSIKKPSTPVNASKTWPISSEGLAYPASXNQKIIPTALMYR 138
+ T L+I+ P + N S TW S G A+PA+ + I + R
Sbjct: 310 YFPTMLTIEAPQSLANRSITWVDWSRGGAHPATFGRGDITEEFLRR 355
>02_02_0712 + 13200174-13200761,13201966-13202616
Length = 412
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 1 HLSTTLSIKKPSTPVNASKTWPISSEGLAYPA 96
+L T L I+ PS N S TW S G +PA
Sbjct: 322 YLPTFLGIRHPSRVTNRSVTWVDWSHGGPHPA 353
>09_04_0489 -
18031187-18031579,18032033-18034030,18034102-18034234,
18035360-18036108
Length = 1090
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 509 GCSKTCCIVTEXNVVVLQEFAVNIEQVAPSVQQLGQAQRSVGD*DVGKEILGGQPS 342
G +K IVT+ + ++ NI+ + + GQ + D + E LGG+PS
Sbjct: 380 GANKNVTIVTQECHITSEDKLGNIDHSLATTKSQGQTPEKMPDETISGE-LGGRPS 434
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 108 ENNPNGVDVSKLKKQCSSDNS-PWKCLQEDRGDVAFVSSADLSNFDESQYELLCL 269
++N + + +++ D + PW C +++G VAF + + D Q L L
Sbjct: 724 QSNEGNLQIQHIRRADRLDGTYPWLCSLQEKGTVAFPEWLNSQSIDGQQTGLATL 778
>07_03_0506 -
18861787-18861917,18862017-18862201,18862542-18862613,
18863163-18863234,18863596-18863667,18864371-18864518,
18864864-18865922,18866663-18866762
Length = 612
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 270 SGRAVRTGSRRSWISRHLKRKRHLPYPLANTSTGCYHLNTV 148
+G +R S+I LK RH +PL++ CY++N V
Sbjct: 64 TGGRFANATRPSFIIPPLKTLRH--FPLSDGPENCYYINNV 102
>03_06_0674 -
35449373-35449465,35449959-35450112,35450763-35450860,
35450947-35451234,35451313-35451503,35451789-35452006,
35452314-35452653,35452726-35453167
Length = 607
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 195 YPLANTSTGCYHLNTVSSVSIH---QRRWDYF 109
Y T T CY + +S IH Q RWDY+
Sbjct: 228 YLTNGTGTDCYSCSFANSTPIHETYQPRWDYW 259
>03_05_1100 - 30404224-30405018,30405100-30405435
Length = 376
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = -3
Query: 186 ANTSTGCYHLNTVSSVSIHQRRWDY----FLVXRRRVCKTLRRNRP 61
+N S+ LNT + RW++ FL ++ + KT++R RP
Sbjct: 100 SNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGKKELLKTIKRRRP 145
>02_05_1044 +
33728623-33728768,33728814-33728993,33729446-33729523,
33729834-33729930,33730206-33730339,33730944-33731025,
33731631-33731717,33731875-33731981,33732674-33732845,
33733018-33733259,33733482-33733563,33733954-33734019,
33734040-33734159,33734935-33735012,33735083-33735178,
33735791-33735897,33736031-33736199,33736402-33736452,
33736567-33736650,33736946-33737040,33737175-33737265,
33737342-33737488,33737614-33737676
Length = 857
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 156 SSDNSPWKCLQEDRGDVAFVSSAD 227
S + SPW CL E++ AF+S+AD
Sbjct: 298 SINKSPWSCLDENK---AFLSTAD 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,107,557
Number of Sequences: 37544
Number of extensions: 334473
Number of successful extensions: 1094
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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