Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_N21
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 32 0.31
AF047655-12|AAD34650.2| 171|Caenorhabditis elegans Hypothetical... 30 1.2
AF002198-1|AAF99929.1| 201|Caenorhabditis elegans Hypothetical ... 30 1.2
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 3.8
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 3.8
U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.7
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 27 8.7
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 27 8.7
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.7
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.7
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.31
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 292 SRPXASRFRQSSSYWLSSKLDKSALETKATSPLSSCKHFHGLLSLE 155
+ P ASRF +SS W K+ K+ L + FH L S+E
Sbjct: 737 TNPKASRFSESSLSWKDVKMSKTVLSFDVFDRIEKIVPFHILTSIE 782
>AF047655-12|AAD34650.2| 171|Caenorhabditis elegans Hypothetical
protein C17B7.12 protein.
Length = 171
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 147 KQCSSDNSPWKCLQEDRGDVAFVSSADLSNF 239
K CS+ KC++ED F S D+ NF
Sbjct: 119 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 149
>AF002198-1|AAF99929.1| 201|Caenorhabditis elegans Hypothetical
protein F35F10.5 protein.
Length = 201
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 147 KQCSSDNSPWKCLQEDRGDVAFVSSADLSNF 239
K CS+ KC++ED F S D+ NF
Sbjct: 118 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 148
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 1 HLSTTLSIKKPSTPVNASKTWPIS 72
HLST LSI P N +K WP+S
Sbjct: 101 HLSTLLSIDGVHIPGNNNKLWPVS 124
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = +1
Query: 226 TYPTSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPP---RISFPTSQSPTLR 396
T T+T T + T TP T +PT T P E P + PT+ +PT
Sbjct: 70 TSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTT-PTTTTETTTTPTTETTTTPTTTTPTTT 128
Query: 397 *AWPNCWTLGATCSIFTANS*RTTTXFSVT 486
P T T + T + TTT + T
Sbjct: 129 TTTPTTTTTETTTTPTTTTTETTTTPTTTT 158
Score = 28.3 bits (60), Expect = 3.8
Identities = 25/88 (28%), Positives = 34/88 (38%)
Frame = +1
Query: 223 PTYPTSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPPRISFPTSQSPTLR*A 402
PT PT+T +T + T TP T +PT T E P + PT+ + T
Sbjct: 78 PTTPTTT--TTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTT 135
Query: 403 WPNCWTLGATCSIFTANS*RTTTXFSVT 486
T T + T + TTT T
Sbjct: 136 TTETTTTPTTTTTETTTTPTTTTTTPTT 163
Score = 27.5 bits (58), Expect = 6.6
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +1
Query: 235 TSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPPRISFPTSQSPTLR*AWPNC 414
T+T +T +A T T T + T P T + P + T+ +PT P
Sbjct: 185 TTTTPTTTTTAPTTTTTTPTTTTTTPTTT-TTVPTTTTTTPTTTTTTTTTPTTTTTTPTT 243
Query: 415 WTLGATCSIFTANS*RTTTXFSVT 486
T AT + T + TTT + T
Sbjct: 244 TTTPATTTSETTTTTPTTTTQTTT 267
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/99 (18%), Positives = 39/99 (39%)
Frame = +1
Query: 25 KKPSTPVNASKTWPISSEGLAYPASXNQKIIPTALMYRN*RNSVQVITARGSVCKRIGEM 204
+ STP + + ++S A + PT + ++T+ +
Sbjct: 217 RSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTT 276
Query: 205 SLSFQVPTYPTSTRASTNCSA*TATPEDGTRSPTMPHVT 321
++ VPT ++ +++ S T TP T + T+ + T
Sbjct: 277 TVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYST 315
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/99 (18%), Positives = 39/99 (39%)
Frame = +1
Query: 25 KKPSTPVNASKTWPISSEGLAYPASXNQKIIPTALMYRN*RNSVQVITARGSVCKRIGEM 204
+ STP + + ++S A + PT + ++T+ +
Sbjct: 199 RSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTT 258
Query: 205 SLSFQVPTYPTSTRASTNCSA*TATPEDGTRSPTMPHVT 321
++ VPT ++ +++ S T TP T + T+ + T
Sbjct: 259 TVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYST 297
>U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical
protein F52C9.5 protein.
Length = 618
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 229 KSALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLG 116
K+ +E K CK F L S C F+ + + P+G
Sbjct: 288 KACIENKINGVALKCKSFDFLSSTSTCAFTSEAAVPVG 325
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 430 SLLVSSSWAKLNGVWAIETSERKSLA--DNQVLDGDMAMLHVA*LENESRPXASRFRQSS 257
SL S+ + LN + ++KS + +N ++ G H S P A+ ++
Sbjct: 63 SLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGCGHCNAGNENSHPAANMVDGNN 122
Query: 256 SYWLSSKLDKSALETKATSPLSSCKHFH 173
S+W+S L + + + + FH
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFH 150
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 430 SLLVSSSWAKLNGVWAIETSERKSLA--DNQVLDGDMAMLHVA*LENESRPXASRFRQSS 257
SL S+ + LN + ++KS + +N ++ G H S P A+ ++
Sbjct: 63 SLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGCGHCNAGNENSHPAANMVDGNN 122
Query: 256 SYWLSSKLDKSALETKATSPLSSCKHFH 173
S+W+S L + + + + FH
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFH 150
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 24 KKAINTGE--CVKNLADFFGGSCIPGVDXPENNPNGVDVSKLKKQCSSDNS 170
+K + TGE +KN + + C G+D P+ + + D SKL ++DN+
Sbjct: 151 EKRLQTGEEFQIKNNSLYCRSDC-RGLDNPDTSASVPDYSKLNNNNNNDNN 200
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 24 KKAINTGE--CVKNLADFFGGSCIPGVDXPENNPNGVDVSKLKKQCSSDNS 170
+K + TGE +KN + + C G+D P+ + + D SKL ++DN+
Sbjct: 151 EKRLQTGEEFQIKNNSLYCRSDC-RGLDNPDTSASVPDYSKLNNNNNNDNN 200
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 430 SLLVSSSWAKLNGVWAIETSERKSLA--DNQVLDGDMAMLHVA*LENESRPXASRFRQSS 257
SL S+ + LN + ++KS + +N ++ G H S P A+ ++
Sbjct: 63 SLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGCGHCNAGNENSHPAANMVDGNN 122
Query: 256 SYWLSSKLDKSALETKATSPLSSCKHFH 173
S+W+S L + + + + FH
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFH 150
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 430 SLLVSSSWAKLNGVWAIETSERKSLA--DNQVLDGDMAMLHVA*LENESRPXASRFRQSS 257
SL S+ + LN + ++KS + +N ++ G H S P A+ ++
Sbjct: 63 SLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGCGHCNAGNENSHPAANMVDGNN 122
Query: 256 SYWLSSKLDKSALETKATSPLSSCKHFH 173
S+W+S L + + + + FH
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFH 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,780,048
Number of Sequences: 27780
Number of extensions: 277580
Number of successful extensions: 1042
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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