Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_N16
         (476 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.7  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   1.7  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   1.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   2.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   2.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   6.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +1

Query: 127 IVGQTYDYSGVVRKVYERVIESSAIPLIKRVEEVYFQFPQP 249
           I G+T++ +G  +K+ +     +A+  ++ V    F  P P
Sbjct: 188 IDGETFEGTGPSKKLAKAAASKAALAKLRNVHSSSFCIPLP 228


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 202 PLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLAE 303
           P+ K +E V+       Q +KGIA + +EN   E
Sbjct: 89  PVYKMIEVVHAGNADDIQLVKGIANECIENAKGE 122


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 202 PLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLAE 303
           P+ K +E V+       Q +KGIA + +EN   E
Sbjct: 89  PVYKMIEVVHAGNADDIQLVKGIANECIENAKGE 122


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 17  RIKSLIRTLNSRACVLKCTKSLYY 88
           +I  + + +    CVL C  ++YY
Sbjct: 92  KIAPIFKGIGYATCVLSCWTNIYY 115


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 17  RIKSLIRTLNSRACVLKCTKSLYY 88
           +I  + + +    CVL C  ++YY
Sbjct: 145 KIAPIFKGIGYATCVLSCWTNIYY 168


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 294 AIL*IFDRYTFD 259
           A+L IFD YT+D
Sbjct: 493 ALLDIFDTYTYD 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,958
Number of Sequences: 438
Number of extensions: 3017
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)