BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_N12
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 91 7e-19
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 91 7e-19
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 90 1e-18
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 90 1e-18
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 90 2e-18
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 90 2e-18
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 90 2e-18
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 90 2e-18
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 90 2e-18
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 90 2e-18
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 77 1e-14
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 77 1e-14
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 76 2e-14
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 76 2e-14
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 54 8e-08
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 54 8e-08
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 38 0.009
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical ... 31 1.1
Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 29 2.5
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73970-4|CAD44112.2| 210|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF000299-9|AAC47984.1| 221|Caenorhabditis elegans Hypothetical ... 28 5.8
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 91.1 bits (216), Expect = 7e-19
Identities = 51/169 (30%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Frame = +3
Query: 174 SVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI-KGVDL 350
SV+LS S+ + LA + + G + EL + + + F+ L + V GV+
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG--GSRIFEE-FSGLMEAVGDTDNGVET 80
Query: 351 KLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNL 530
K+ N+V++ ++ + ++ + ++L+F + E+AA +NT+VE+HTN +IK+L
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 531 VDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVP 677
+ P+ ++ LVNA+YFK W+ KF KE T R F ++ + Q+P
Sbjct: 141 I-PADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIP 188
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 91.1 bits (216), Expect = 7e-19
Identities = 51/169 (30%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Frame = +3
Query: 174 SVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI-KGVDL 350
SV+LS S+ + LA + + G + EL + + + F+ L + V GV+
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG--GSRIFEE-FSGLMEAVGDTDNGVET 80
Query: 351 KLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNL 530
K+ N+V++ ++ + ++ + ++L+F + E+AA +NT+VE+HTN +IK+L
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 531 VDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVP 677
+ P+ ++ LVNA+YFK W+ KF KE T R F ++ + Q+P
Sbjct: 141 I-PADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIP 188
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 90.2 bits (214), Expect = 1e-18
Identities = 47/165 (28%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAI-DFPNDNVTKAVFTDLNQKVR- 329
++N +S + S S+ + L+ + +A+ GE+ DE+ KA+ + D + F++++ +
Sbjct: 27 QQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLV 86
Query: 330 SIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+ KG ++ +AN ++ + + + ++N+ LNF E +A IN +V ++T
Sbjct: 87 AEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENT 146
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPF 644
IK +++P S+ VL NA YFK +W+ KF KE T R F
Sbjct: 147 KGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 90.2 bits (214), Expect = 1e-18
Identities = 47/165 (28%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAI-DFPNDNVTKAVFTDLNQKVR- 329
++N +S + S S+ + L+ + +A+ GE+ DE+ KA+ + D + F++++ +
Sbjct: 27 QQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLV 86
Query: 330 SIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+ KG ++ +AN ++ + + + ++N+ LNF E +A IN +V ++T
Sbjct: 87 AEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENT 146
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPF 644
IK +++P S+ VL NA YFK +W+ KF KE T R F
Sbjct: 147 KGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/170 (27%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKA-IDFPNDNVTKAVFTDLNQKVRS 332
++N +S+ S S+ + L+ + +A+ GE+ D++ +A + D + F +++ + +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 333 I-KGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+G ++KLAN V+ G ++ + + ++N+ +L+F E A IN +V ++T
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD 659
IK ++ S++S VL NA+YFK W++KF K+ T F + D
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSAD 187
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/170 (27%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKA-IDFPNDNVTKAVFTDLNQKVRS 332
++N +S+ S S+ + L+ + +A+ GE+ D++ +A + D + F +++ + +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 333 I-KGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+G ++KLAN V+ G ++ + + ++N+ +L+F E A IN +V ++T
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD 659
IK ++ S++S VL NA+YFK W++KF K+ T F + D
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSAD 187
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/170 (27%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKA-IDFPNDNVTKAVFTDLNQKVRS 332
++N +S+ S S+ + L+ + +A+ GE+ D++ +A + D + F +++ + +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 333 I-KGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+G ++KLAN V+ G ++ + + ++N+ +L+F E A IN +V ++T
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD 659
IK ++ S++S VL NA+YFK W++KF K+ T F + D
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSAD 187
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/170 (27%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKA-IDFPNDNVTKAVFTDLNQKVRS 332
++N +S+ S S+ + L+ + +A+ GE+ D++ +A + D + F +++ + +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 333 I-KGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+G ++KLAN V+ G ++ + + ++N+ +L+F E A IN +V ++T
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD 659
IK ++ S++S VL NA+YFK W++KF K+ T F + D
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSAD 187
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/170 (27%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKA-IDFPNDNVTKAVFTDLNQKVRS 332
++N +S+ S S+ + L+ + +A+ GE+ D++ +A + D + F +++ + +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 333 I-KGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+G ++KLAN V+ G ++ + + ++N+ +L+F E A IN +V ++T
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD 659
IK ++ S++S VL NA+YFK W++KF K+ T F + D
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSAD 187
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/170 (27%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKA-IDFPNDNVTKAVFTDLNQKVRS 332
++N +S+ S S+ + L+ + +A+ GE+ D++ +A + D + F +++ + +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 333 I-KGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHT 509
+G ++KLAN V+ G ++ + + ++N+ +L+F E A IN +V ++T
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 510 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD 659
IK ++ S++S VL NA+YFK W++KF K+ T F + D
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSAD 187
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/147 (25%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Frame = +3
Query: 180 ILSAFSVMIPLAQLAIASTGES-HDELLKAIDFPNDNVTKAVFTDLNQKVRS-IKGVDLK 353
+ S S+++ LA + + + G + HD ++ D F+ +N+ + S + V+
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETL 91
Query: 354 LANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLV 533
+AN+++++ + F R+ +N+E ++F K++EAA I+N ++ + T +I +++
Sbjct: 92 IANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMI 151
Query: 534 DPSSLDSSTQCVLVNAIYFKGSWKDKF 614
P +L +L+NAI+F+G W+ KF
Sbjct: 152 KPDNL-KDVDAILINAIFFQGDWRRKF 177
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/147 (25%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Frame = +3
Query: 180 ILSAFSVMIPLAQLAIASTGES-HDELLKAIDFPNDNVTKAVFTDLNQKVRS-IKGVDLK 353
+ S S+++ LA + + + G + HD ++ D F+ +N+ + S + V+
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETL 91
Query: 354 LANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLV 533
+AN+++++ + F R+ +N+E ++F K++EAA I+N ++ + T +I +++
Sbjct: 92 IANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMI 151
Query: 534 DPSSLDSSTQCVLVNAIYFKGSWKDKF 614
P +L +L+NAI+F+G W+ KF
Sbjct: 152 KPDNL-KDVDAILINAIFFQGDWRRKF 177
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 76.2 bits (179), Expect = 2e-14
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Frame = +3
Query: 168 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAI-DFPNDNVTKAVFTDLNQKVRS-IKG 341
++S++ S S+ + L+ + G S D++ + D F+ ++++V++ KG
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 342 VDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRI 521
V++ LANKVY+ G +N F + + ++ ++L+ A IN++V TN +I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDL-TTPAAVQEINSFVNTATNGKI 139
Query: 522 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPF 644
KN+ S+ + +L+N+IYFK W DKFD ++ F
Sbjct: 140 KNIATQDSIKDAI-ALLINSIYFKADWDDKFDGMSVSEQDF 179
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 76.2 bits (179), Expect = 2e-14
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Frame = +3
Query: 168 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAI-DFPNDNVTKAVFTDLNQKVRS-IKG 341
++S++ S S+ + L+ + G S D++ + D F+ ++++V++ KG
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 342 VDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRI 521
V++ LANKVY+ G +N F + + ++ ++L+ A IN++V TN +I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDL-TTPAAVQEINSFVNTATNGKI 139
Query: 522 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPF 644
KN+ S+ + +L+N+IYFK W DKFD ++ F
Sbjct: 140 KNIATQDSIKDAI-ALLINSIYFKADWDDKFDGMSVSEQDF 179
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--DNVTKAVFTDLNQKVR 329
+++ +S + S ++ + L L A+ GE+ ++ + F N D F++++ +
Sbjct: 19 QQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCL-FKNATDGEMVTHFSNVSTALS 77
Query: 330 SIK-GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDH 506
++K +K+ N + NG + + ++N EV + + +E IN + ++
Sbjct: 78 AMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIREN 137
Query: 507 TNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPF 644
T+ IK + S+D V ++A F+ W++KF K T + F
Sbjct: 138 TDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEF 183
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Frame = +3
Query: 156 KKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--DNVTKAVFTDLNQKVR 329
+++ +S + S ++ + L L A+ GE+ ++ + F N D F++++ +
Sbjct: 18 QQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCL-FKNATDGEMVTHFSNVSTALS 76
Query: 330 SIK-GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDH 506
++K +K+ N + NG + + ++N EV + + +E IN + ++
Sbjct: 77 AMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIREN 136
Query: 507 TNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPF 644
T+ IK + S+D V ++A F+ W++KF K T + F
Sbjct: 137 TDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEF 182
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 384 NELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDH-TNKRIKNLVDPSSLDSST 560
N L A V+ +FN Q + AN+INT V+ +NKR++ ++ ++ T
Sbjct: 189 NGLTPSVAFVALTIFNQLRQPMRM-----VANLINTLVQARVSNKRLRQFLNDEEMERKT 243
Query: 561 QCVLVNAIYFKG---SWKDKFDKELTQD 635
+ L NAI FK +WK + + +D
Sbjct: 244 EVALGNAIVFKNASLNWKGPQNPPVLKD 271
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 111 NGNDQFTARMFNEVVKKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN 281
+ D+F +F +++ DK + S+++P A + I G DE++ IDF N
Sbjct: 188 SSRDKFNFSVFMRDLREKLDKQLKSYIVSILLPPAGVDIWEMGYDLDEIIDHIDFMN 244
>AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical
protein M151.6 protein.
Length = 352
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/100 (22%), Positives = 47/100 (47%)
Frame = +3
Query: 318 QKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWV 497
Q ++ ++G ++ L N + I+N ++ + + S FN ++N G N NI+ +
Sbjct: 237 QNLKWVRGSNVTL-NNILISNCSQFFTKDSQFSSKDFNLLLKNWLRGSNPYLLNIVMLFS 295
Query: 498 EDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFD 617
E + N+ ++ ++ D T C+ + K +K D
Sbjct: 296 EANENRLVETII----FDGITDCIALEVQGMKQFTVEKHD 331
>Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical
protein C44H9.6 protein.
Length = 610
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 288 VTKAVFTDLNQKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNL--NFGK 461
+TKA ++ + S K ++ VY +N N N+ + R + E+Q + N G
Sbjct: 447 ITKAFSSEKCHLLESKKTNQMEEGTGVYTSNNNNNNNNYDEYDRSEISDEIQQIGSNDGS 506
Query: 462 NEEAANIINTWVEDHTNKRIKNLVDPSSLD 551
+ + I T E N + ++PS+ +
Sbjct: 507 LSDGCDFIET--EITINNETPDPIEPSTAE 534
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 348 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIIN---TWVEDHTNKR 518
+ LA + N + N + A S+ + N + LNF +NEE IIN T + DH K
Sbjct: 61 IALAQVLSHKNVGKFNKKVAFRSQKLENVSLA-LNFFQNEENIKIINIDSTHIVDHNKKL 119
Query: 519 IKNLV 533
I LV
Sbjct: 120 ILGLV 124
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 114 GNDQFTARMFNEVVKKNPDKSVILSAFSVMIPLAQLA---IASTGESHDELLKAIDFPND 284
G+D + N+V++KN +A + P+A+ A + ES E K D
Sbjct: 72 GSDDMMSSHHNDVIEKNYFNDNAPTAALLESPIAEEARKLVQDAVESASEYKKQAVDSGD 131
Query: 285 NVTKAVFTDLNQKVRSIKGVDLKLANKVYIANGNELND 398
+ + + ++ QK+ +K + +K Y G+ +++
Sbjct: 132 EIGRELLDNVEQKIEQVKEPIVDSLHKAYDGVGDFVHE 169
>Z73970-4|CAD44112.2| 210|Caenorhabditis elegans Hypothetical
protein C29A12.3b protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 261 KAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLANKVYI 374
K +DF D++T V+ +NQ S +G++L +A I
Sbjct: 49 KVLDFSPDDLTACVYMSVNQLGPSYEGLELGVAENSLI 86
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 261 KAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLANKVYI 374
K +DF D++T V+ +NQ S +G++L +A I
Sbjct: 49 KVLDFSPDDLTACVYMSVNQLGPSYEGLELGVAENSLI 86
>AF000299-9|AAC47984.1| 221|Caenorhabditis elegans Hypothetical
protein E03H12.9 protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -3
Query: 698 SPSFVHGRDLYGLIFVNMEWTVLC-QFLIKFVFPTSL--KVNCIYENTLCATVQRTRIHQ 528
S SF G D Y L F N WT+ Q I + L V+ ++E+ A+V T I
Sbjct: 135 SYSFQDGNDGYTLSFSNPSWTITYQQKCIDNTWTMFLTPAVSNVHESAPLASVDHTSI-L 193
Query: 527 IFDTFIGVVFNPSINN 480
I F+G F S+++
Sbjct: 194 ITGMFMGECFTNSVDD 209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,821,473
Number of Sequences: 27780
Number of extensions: 325316
Number of successful extensions: 913
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -