Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_N09
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CU457744-2|CAM36368.1| 169|Caenorhabditis elegans Hypothetical ... 40 0.002
AL033512-2|CAA22074.1| 390|Caenorhabditis elegans Hypothetical ... 30 1.3
U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical p... 29 3.8
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 28 5.1
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 28 5.1
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 27 8.9
>CU457744-2|CAM36368.1| 169|Caenorhabditis elegans Hypothetical
protein T06A10.3 protein.
Length = 169
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 68 SAYCPYNGVHSIDHYKLHLHLVRCGKQ----HPRA-KIAKCPYDSVHVVDEVEKYHHSSV 232
S CPYN H + + + HL +C + +P + K+ +C Y+ H + E E H +
Sbjct: 18 SITCPYNSDHKVSMEEFNTHLWKCRTEKLHFYPHSLKLKRCSYNMRHFLPEEELQFH-EI 76
Query: 233 CCKRDMLD 256
CKR D
Sbjct: 77 FCKRQSAD 84
>AL033512-2|CAA22074.1| 390|Caenorhabditis elegans Hypothetical
protein Y49A3A.3 protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 65 DSAYCPYNGVHSIDHYKLHLHLVRCGKQHPRAKIAKCPYDSV 190
D CP +G H+I L +HL RC + A+ K +S+
Sbjct: 50 DRMVCPNDGKHTILKADLEIHLTRCNSRIRDAEYIKIDANSI 91
>U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical
protein ZK1248.15 protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +2
Query: 239 KRDMLDNMLYIMDDDQRPVVPVQPAPTIHCDENWDDEESATYIPDPWKNPYIIKKVKGAT 418
++D+ +N+ MDDD+ V V P P E DDEE + WK P + T
Sbjct: 67 RKDVEENIHGTMDDDKME-VDVVPPPKRKSMEKLDDEEFS------WKRPRRSDSSERIT 119
Query: 419 KSERRRARMEGVKSYRARQL 478
K E + GV+S+ + L
Sbjct: 120 KKEDIPS-CSGVESHSNKML 138
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/115 (20%), Positives = 50/115 (43%)
Frame = +2
Query: 26 SSKTIKMAAPRPYDSAYCPYNGVHSIDHYKLHLHLVRCGKQHPRAKIAKCPYDSVHVVDE 205
SSK IK + Y P + ++ + R P+ + + P+ + +V +
Sbjct: 1257 SSKEIKTSG----QPEYVPETSEAFVSDPEIFQRVKRASSTEPKTQKTE-PHAPIFIVGQ 1311
Query: 206 VEKYHHSSVCCKRDMLDNMLYIMDDDQRPVVPVQPAPTIHCDENWDDEESATYIP 370
+ S+ +++D +++ +DD++ V V ++ EN DD +A +P
Sbjct: 1312 STEDDEQSIA---NVIDELVH--EDDEKKVPEVTANISVSASENIDDSTTANAVP 1361
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/115 (20%), Positives = 50/115 (43%)
Frame = +2
Query: 26 SSKTIKMAAPRPYDSAYCPYNGVHSIDHYKLHLHLVRCGKQHPRAKIAKCPYDSVHVVDE 205
SSK IK + Y P + ++ + R P+ + + P+ + +V +
Sbjct: 1257 SSKEIKTSG----QPEYVPETSEAFVSDPEIFQRVKRASSTEPKTQKTE-PHAPIFIVGQ 1311
Query: 206 VEKYHHSSVCCKRDMLDNMLYIMDDDQRPVVPVQPAPTIHCDENWDDEESATYIP 370
+ S+ +++D +++ +DD++ V V ++ EN DD +A +P
Sbjct: 1312 STEDDEQSIA---NVIDELVH--EDDEKKVPEVTANISVSASENIDDSTTANAVP 1361
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/115 (20%), Positives = 50/115 (43%)
Frame = +2
Query: 26 SSKTIKMAAPRPYDSAYCPYNGVHSIDHYKLHLHLVRCGKQHPRAKIAKCPYDSVHVVDE 205
SSK IK + Y P + ++ + R P+ + + P+ + +V +
Sbjct: 1257 SSKEIKTSG----QPEYVPETSEAFVSDPEIFQRVKRASSTEPKTQKTE-PHAPIFIVGQ 1311
Query: 206 VEKYHHSSVCCKRDMLDNMLYIMDDDQRPVVPVQPAPTIHCDENWDDEESATYIP 370
+ S+ +++D +++ +DD++ V V ++ EN DD +A +P
Sbjct: 1312 STEDDEQSIA---NVIDELVH--EDDEKKVPEVTANISVSASENIDDSTTANAVP 1361
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 364 HSRPVEEPLHYKES*RCH*I*TEKG*NGRRQELSRSTAYFRVNKHSTYC 510
H P + PL KES RCH EK + R S T + ++N C
Sbjct: 324 HYEPSKWPLSDKESDRCHVNIVEKVQSIRSDHESYVTQFAKINNEVAIC 372
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 364 HSRPVEEPLHYKES*RCH*I*TEKG*NGRRQELSRSTAYFRVNKHSTYC 510
H P + PL KES RCH EK + R S T + ++N C
Sbjct: 324 HYEPSKWPLSDKESDRCHVNIVEKVQSIRSDHESYVTQFAKINNEVAIC 372
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 308 PAPTIHCDENWDDEESATYIP-DPWK 382
PAPTI N ++EES+ Y+ PW+
Sbjct: 238 PAPTIQLRNNDENEESSAYLRYKPWE 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,214,111
Number of Sequences: 27780
Number of extensions: 329030
Number of successful extensions: 907
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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