Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_N09
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    26   0.28 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.84 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   1.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   1.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   1.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.4  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   3.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   3.4  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +2

Query: 242 RDMLDNMLYIMDDDQRPVVPVQPAPTIHCDENWDDE------ESATYIPDPWKNPYIIKK 403
           +++LDN+L     D+R + PVQ A    C   W  +       S+T   DP KN Y  + 
Sbjct: 62  KEILDNLLLSTRYDKRLLPPVQDA-DFCCGMRWPGDATGLSNRSSTSSNDP-KNQYKNQN 119

Query: 404 VKGATKSERRRARMEGVKSYRARQLI 481
               T  +  R  + G  +     L+
Sbjct: 120 NNHYTSHQHLRTHLRGTLTVNVSVLL 145


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 466 AIALDAFHSSPSPFRFSGTFNFLYNVGVLPRVWNVRGRLLIIPILIAMDR 317
           AI+LD +     P R+         V  +  VW + G +  +PI + + R
Sbjct: 118 AISLDRYIHIKDPLRYGRWVTRRIAVAGIAVVWLLAGLISFVPISLGLHR 167


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 203 HRRHGPSRTGIWQFLHADAVCRT 135
           ++  GP+  G  +F H DA CRT
Sbjct: 41  NKSSGPNELG--RFKHTDACCRT 61


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 203 HRRHGPSRTGIWQFLHADAVCRT 135
           ++  GP+  G  +F H DA CRT
Sbjct: 46  NKSSGPNELG--RFKHTDACCRT 66


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 203 HRRHGPSRTGIWQFLHADAVCRT 135
           ++  GP+  G  +F H DA CRT
Sbjct: 46  NKSSGPNELG--RFKHTDACCRT 66


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 242 RDMLDNMLYIMDDDQRPVVPVQPAPTIH 325
           +++LDN+L     D+R + PVQ   T++
Sbjct: 62  KEILDNLLLSTRYDKRLLPPVQGTLTVN 89


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 242 RDMLDNMLYIMDDDQRPVVPVQPAPTIH 325
           +++LDN+L     D+R + PVQ   T++
Sbjct: 62  KEILDNLLLSTRYDKRLLPPVQGTLTVN 89


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 242 RDMLDNMLYIMDDDQRPVVPVQPAPTIH 325
           +++LDN+L     D+R + PVQ   T++
Sbjct: 62  KEILDNLLLSTRYDKRLLPPVQGTLTVN 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,438
Number of Sequences: 438
Number of extensions: 4057
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)