Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_N05
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein. 115 1e-25
BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome, ma... 115 1e-25
BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome, ma... 115 1e-25
BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome, ma... 115 1e-25
BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome, ma... 115 1e-25
U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen pr... 101 3e-21
U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein. 81 4e-15
L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein. 81 4e-15
CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein. 81 4e-15
CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein. 81 4e-15
BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome, ma... 81 4e-15
BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome, ma... 81 4e-15
BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome, ma... 81 4e-15
AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA... 81 4e-15
D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA2... 64 3e-10
CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein. 64 3e-10
BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome, ma... 64 3e-10
BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome, ma... 64 3e-10
BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome, ma... 64 3e-10
AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing... 64 3e-10
AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA... 64 3e-10
CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein. 64 4e-10
U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen pr... 48 3e-05
D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein. 31 4.1
BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7 ... 31 4.1
BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7 ... 31 4.1
BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7 ... 31 4.1
AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated p... 31 4.1
M73747-1|AAA70232.1| 763|Homo sapiens thyroid stimulating hormo... 29 9.4
M32215-1|AAA61236.1| 764|Homo sapiens thyroid stimulatory hormo... 29 9.4
M31774-1|AAA36783.1| 764|Homo sapiens protein ( Human thyrotrop... 29 9.4
AY429111-1|AAR07906.1| 764|Homo sapiens thyroid stimulating hor... 29 9.4
AF035261-1|AAB87990.1| 470|Homo sapiens thyroid stimulating hor... 29 9.4
AC010582-1|AAF26775.1| 533|Homo sapiens TSHR protein. 29 9.4
AB209207-1|BAD92444.1| 770|Homo sapiens thyroid stimulating hor... 29 9.4
>CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein.
Length = 254
Score = 115 bits (276), Expect = 1e-25
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 8/121 (6%)
Frame = +2
Query: 260 LSDVHQDLNIPVPSAV--TNE------PQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVA 415
L+ +H D+N+PVP + TN P K+ R+D E + GTKV+V+PNG +
Sbjct: 55 LTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLK 110
Query: 416 CNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVES 595
N+ L ++I VKP IR L+E N + MW+ +IP+IEDGNNFGVSIQE+T+AE+++VES
Sbjct: 111 SNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVES 170
Query: 596 E 598
E
Sbjct: 171 E 171
>BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 115 bits (276), Expect = 1e-25
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 8/121 (6%)
Frame = +2
Query: 260 LSDVHQDLNIPVPSAV--TNE------PQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVA 415
L+ +H D+N+PVP + TN P K+ R+D E + GTKV+V+PNG +
Sbjct: 55 LTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLK 110
Query: 416 CNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVES 595
N+ L ++I VKP IR L+E N + MW+ +IP+IEDGNNFGVSIQE+T+AE+++VES
Sbjct: 111 SNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVES 170
Query: 596 E 598
E
Sbjct: 171 E 171
>BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 115 bits (276), Expect = 1e-25
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 8/121 (6%)
Frame = +2
Query: 260 LSDVHQDLNIPVPSAV--TNE------PQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVA 415
L+ +H D+N+PVP + TN P K+ R+D E + GTKV+V+PNG +
Sbjct: 55 LTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLK 110
Query: 416 CNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVES 595
N+ L ++I VKP IR L+E N + MW+ +IP+IEDGNNFGVSIQE+T+AE+++VES
Sbjct: 111 SNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVES 170
Query: 596 E 598
E
Sbjct: 171 E 171
>BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 115 bits (276), Expect = 1e-25
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 8/121 (6%)
Frame = +2
Query: 260 LSDVHQDLNIPVPSAV--TNE------PQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVA 415
L+ +H D+N+PVP + TN P K+ R+D E + GTKV+V+PNG +
Sbjct: 55 LTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLK 110
Query: 416 CNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVES 595
N+ L ++I VKP IR L+E N + MW+ +IP+IEDGNNFGVSIQE+T+AE+++VES
Sbjct: 111 SNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVES 170
Query: 596 E 598
E
Sbjct: 171 E 171
>BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 115 bits (276), Expect = 1e-25
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 8/121 (6%)
Frame = +2
Query: 260 LSDVHQDLNIPVPSAV--TNE------PQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVA 415
L+ +H D+N+PVP + TN P K+ R+D E + GTKV+V+PNG +
Sbjct: 55 LTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLK 110
Query: 416 CNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVES 595
N+ L ++I VKP IR L+E N + MW+ +IP+IEDGNNFGVSIQE+T+AE+++VES
Sbjct: 111 SNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVES 170
Query: 596 E 598
E
Sbjct: 171 E 171
>U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen
protein.
Length = 267
Score = 101 bits (241), Expect = 3e-21
Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 21/134 (15%)
Frame = +2
Query: 260 LSDVHQDLNIPVPSAV--TNE------PQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVA 415
L+ +H D+N+PVP + TN P K+ R+D E + GTKV+V+PNG +
Sbjct: 55 LTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLK 110
Query: 416 CNKPLTELIHLVKPHIRELVEDSNL-------------LTMWISFMIPKIEDGNNFGVSI 556
N+ L ++I VKP IR L+E N + MW+ +IP+IEDGNNFGVSI
Sbjct: 111 SNQQLVDIIEKVKPEIRLLIEKCNTPSGKGPHICFDLQVKMWVQLLIPRIEDGNNFGVSI 170
Query: 557 QEDTLAEIQSVESE 598
QE+T+AE+++VESE
Sbjct: 171 QEETVAELRTVESE 184
>U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA28
alpha protein.
Length = 249
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/114 (33%), Positives = 64/114 (56%)
Frame = +2
Query: 257 SLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTE 436
+LS++ L+IPVP V + + +R + E + P G V CN+ +
Sbjct: 53 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVV 112
Query: 437 LIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
L+ +KP I++++E NL+T W+ IP+IEDGNNFGV++QE + S+ ++
Sbjct: 113 LLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTK 166
>D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA28
suunit beta protein.
Length = 239
Score = 64.5 bits (150), Expect = 3e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVPKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 64.5 bits (150), Expect = 3e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVPKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 64.5 bits (150), Expect = 3e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVPKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 64.5 bits (150), Expect = 3e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVPKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 64.5 bits (150), Expect = 3e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVPKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing
protein 22 protein.
Length = 239
Score = 64.5 bits (150), Expect = 3e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVPKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA28
beta protein.
Length = 239
Score = 64.5 bits (150), Expect = 3e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVPKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 64.1 bits (149), Expect = 4e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +2
Query: 224 ELLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPN 403
+LL+ L+ + L+IP+P +P P+ D E + K LP
Sbjct: 45 QLLQEDSLNVADLTSLRAPLDIPIP-----DPP---PKDDEMETDKQEKKEVHKCGFLPG 96
Query: 404 GSVACNKPLTELIHLVKPHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 583
N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 97 -----NEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 584 SVESE 598
+V+++
Sbjct: 152 AVKTK 156
>U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen
protein.
Length = 54
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +2
Query: 317 PQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTELIHLVKPHIRELVEDSN 487
P K+ R+D E + GTKV+V+PNG + N+ L ++I VKP IR L+E N
Sbjct: 1 PTYKKRRLDECE----KAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 53
>D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein.
Length = 876
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 335 RVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTELIHLVKPHIRELVEDSNLLT 496
++ SE+ N S+ T+ ++L + + C+ P T+L + H R + NL+T
Sbjct: 815 KISQSELFDNKSLT-TECHLLDSPGLNCSNPFTQLERRHQEHARHISFGGNLIT 867
>BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 765
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 335 RVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTELIHLVKPHIRELVEDSNLLT 496
++ SE+ N S+ T+ ++L + + C+ P T+L + H R + NL+T
Sbjct: 704 KISQSELFDNKSLT-TECHLLDSPGLNCSNPFTQLERRHQEHARHISFGGNLIT 756
>BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 335 RVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTELIHLVKPHIRELVEDSNLLT 496
++ SE+ N S+ T+ ++L + + C+ P T+L + H R + NL+T
Sbjct: 785 KISQSELFDNKSLT-TECHLLDSPGLNCSNPFTQLERRHQEHARHISFGGNLIT 837
>BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 335 RVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTELIHLVKPHIRELVEDSNLLT 496
++ SE+ N S+ T+ ++L + + C+ P T+L + H R + NL+T
Sbjct: 785 KISQSELFDNKSLT-TECHLLDSPGLNCSNPFTQLERRHQEHARHISFGGNLIT 837
>AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated
protein protein.
Length = 846
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 335 RVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTELIHLVKPHIRELVEDSNLLT 496
++ SE+ N S+ T+ ++L + + C+ P T+L + H R + NL+T
Sbjct: 785 KISQSELFDNKSLT-TECHLLDSPGLNCSNPFTQLERRHQEHARHISFGGNLIT 837
>M73747-1|AAA70232.1| 763|Homo sapiens thyroid stimulating hormone
receptor protein.
Length = 763
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 237 VSRSSI*LLRFFP----GNPLMY*VFSLLFER-ILVLLYLLNVC 121
VS S I L+ F+P NP +Y +F+ F+R + +LL +C
Sbjct: 655 VSNSKILLVLFYPINSCANPFLYAIFTKAFQRDVFILLSKFGIC 698
>M32215-1|AAA61236.1| 764|Homo sapiens thyroid stimulatory hormone
receptor protein.
Length = 764
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 237 VSRSSI*LLRFFP----GNPLMY*VFSLLFER-ILVLLYLLNVC 121
VS S I L+ F+P NP +Y +F+ F+R + +LL +C
Sbjct: 656 VSNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGIC 699
>M31774-1|AAA36783.1| 764|Homo sapiens protein ( Human thyrotropin
receptor (TSH) mRNA, complete cds. ).
Length = 764
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 237 VSRSSI*LLRFFP----GNPLMY*VFSLLFER-ILVLLYLLNVC 121
VS S I L+ F+P NP +Y +F+ F+R + +LL +C
Sbjct: 656 VSNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGIC 699
>AY429111-1|AAR07906.1| 764|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 764
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 237 VSRSSI*LLRFFP----GNPLMY*VFSLLFER-ILVLLYLLNVC 121
VS S I L+ F+P NP +Y +F+ F+R + +LL +C
Sbjct: 656 VSNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGIC 699
>AF035261-1|AAB87990.1| 470|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 470
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 237 VSRSSI*LLRFFP----GNPLMY*VFSLLFER-ILVLLYLLNVC 121
VS S I L+ F+P NP +Y +F+ F+R + +LL +C
Sbjct: 362 VSNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGIC 405
>AC010582-1|AAF26775.1| 533|Homo sapiens TSHR protein.
Length = 533
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 237 VSRSSI*LLRFFP----GNPLMY*VFSLLFER-ILVLLYLLNVC 121
VS S I L+ F+P NP +Y +F+ F+R + +LL +C
Sbjct: 425 VSNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGIC 468
>AB209207-1|BAD92444.1| 770|Homo sapiens thyroid stimulating
hormone receptor variant protein.
Length = 770
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 237 VSRSSI*LLRFFP----GNPLMY*VFSLLFER-ILVLLYLLNVC 121
VS S I L+ F+P NP +Y +F+ F+R + +LL +C
Sbjct: 662 VSNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGIC 705
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,528,182
Number of Sequences: 237096
Number of extensions: 1748311
Number of successful extensions: 3630
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3623
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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