Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_N05
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical ... 105 2e-23
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr... 31 0.48
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 30 1.1
Z68752-5|CAA92984.1| 199|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 28 5.9
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 28 5.9
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical ... 27 7.7
>AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical
protein Y66D12A.9 protein.
Length = 248
Score = 105 bits (252), Expect = 2e-23
Identities = 47/108 (43%), Positives = 70/108 (64%)
Frame = +2
Query: 275 QDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVACNKPLTELIHLVK 454
+ LNIP+P A+ + P V V G ++ +G+V CN+ L +L+ LV+
Sbjct: 60 KSLNIPIPDALNGTTDSDEPAVKRQRVDEKPK--GAPIFAFSSGTVPCNENLAQLMDLVR 117
Query: 455 PHIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESE 598
P +R+ VE N + MWI+ +IP+IEDGNNFGV IQE+TL+E+++VESE
Sbjct: 118 PKLRDAVEQCNNVKMWITLLIPRIEDGNNFGVGIQEETLSEVRNVESE 165
>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical
protein C34F6.9 protein.
Length = 1181
Score = 31.5 bits (68), Expect = 0.48
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 269 VHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGTKVYVLPNGSVAC-NKPLTELIH 445
V Q IP P+ + +PQA +PR +V + S++ T L +V C + L +L+
Sbjct: 531 VKQAAKIPQPAVLKEDPQAVKPRPPKKDVLAGYSVE-TIFLALTGETVLCRSHSLEDLVR 589
Query: 446 L 448
L
Sbjct: 590 L 590
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 118 MTDVKKVQEYKDSLKQKAEHLI 183
+ D++ VQEY++ L +KAEHL+
Sbjct: 390 LKDIESVQEYQEILTEKAEHLM 411
>Z68752-5|CAA92984.1| 199|Caenorhabditis elegans Hypothetical
protein T12G3.5 protein.
Length = 199
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 182 YIRGFPGKNRNN*IELLETSHFRN 253
++RGFPG+++ N EL++ H+RN
Sbjct: 112 WLRGFPGQHKAN--ELIKLIHYRN 133
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 124 DVKKVQEYKDSLKQKAEHLI 183
D + V+EY++ L +KAEHL+
Sbjct: 393 DTESVEEYREILTEKAEHLM 412
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 458 HIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLA 574
H+ EL +S +L+ WIS + EDG G S+ E+ L+
Sbjct: 538 HLIELNTESEMLS-WISVLQSSSEDGIATGSSVDENELS 575
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 458 HIRELVEDSNLLTMWISFMIPKIEDGNNFGVSIQEDTLA 574
H+ EL +S +L+ WIS + EDG G S+ E+ L+
Sbjct: 416 HLIELNTESEMLS-WISVLQSSSEDGIATGSSVDENELS 453
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 227 LLETSHFRNRSLSDVHQDLNIPVPSAVTNEPQAKRPRVDSSEVSSNASIDGT 382
L ++S RNRS+S ++ VP N +RP + S SS S+D T
Sbjct: 588 LADSSIPRNRSVSPFSNNVTFTVPRTPRNNILTERPSL-SQIPSSRQSMDST 638
>Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 132 EGTGVQGFSQTEG*TLNTLEGSREKIVIIKL 224
E TG++ FS+ + T+ TL+ REK V ++L
Sbjct: 89 EKTGLERFSRAQSKTIETLKQMREKGVKVEL 119
>AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 132 EGTGVQGFSQTEG*TLNTLEGSREKIVIIKL 224
E TG++ FS+ + T+ TL+ REK V ++L
Sbjct: 89 EKTGLERFSRAQSKTIETLKQMREKGVKVEL 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,593,639
Number of Sequences: 27780
Number of extensions: 277684
Number of successful extensions: 705
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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