Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_N05
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.57 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.57 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.0  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   4.0  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    22   4.0  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   9.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 254 DFESVMFPEAQFNYYDFFP 198
           D ++ M+P+  + YYDF+P
Sbjct: 17  DEKNEMYPKDPYLYYDFYP 35


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 254 DFESVMFPEAQFNYYDFFP 198
           D ++ M+P+  + YYDF+P
Sbjct: 32  DEKNEMYPKDPYLYYDFYP 50


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 474 TSSLICGLTRCINSVSGLLHATEPLGSTYTFVPSI 370
           T   + G TR +++  G L  TEP+GS     PS+
Sbjct: 183 TKHRLTGETR-LSATKGRLVITEPVGSVRPKFPSM 216


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 177 LNTLEGSREKIVIIKLSFWKHHT 245
           L+ L+  RE+ + I ++ WK  T
Sbjct: 60  LDKLKAERERGITIDIALWKFET 82


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 177 LNTLEGSREKIVIIKLSFWKHHT 245
           L+ L+  RE+ + I ++ WK  T
Sbjct: 3   LDKLKAERERGITIDIALWKFET 25


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 177 LNTLEGSREKIVIIKLSFWKHHT 245
           L+ L+  RE+ + I ++ WK  T
Sbjct: 60  LDKLKAERERGITIDIALWKFET 82


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 404 GSVACNKPLTELIHL 448
           GSV C+ P T + HL
Sbjct: 163 GSVVCSLPQTIVFHL 177


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 182 YIRGFPGKN 208
           +++GFPGKN
Sbjct: 25  FLQGFPGKN 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,137
Number of Sequences: 438
Number of extensions: 3670
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)