Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_M24
(305 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 29 0.95
07_03_1768 - 29363893-29364010,29364568-29365541 27 2.2
04_03_0703 - 18870287-18871351,18871542-18871733 27 2.2
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 27 2.9
02_03_0066 + 14657007-14657655,14658319-14658581 27 3.8
05_04_0264 + 19537582-19537919,19539670-19539826,19539939-195400... 26 5.1
04_01_0526 - 6901003-6901056,6901070-6901404,6901423-6901607,690... 26 5.1
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 26 6.7
06_02_0322 + 14369221-14369540,14370240-14370918,14371347-143715... 26 6.7
04_01_0035 - 433848-434372,434905-435381 26 6.7
01_06_0247 + 27851206-27851255,27851382-27851496,27852280-278524... 26 6.7
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 26 6.7
01_01_0757 - 5840736-5842574 26 6.7
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 26 6.7
11_01_0308 + 2307623-2307697,2308554-2308790,2310109-2310282 25 8.9
06_03_0028 + 15659824-15661266 25 8.9
04_04_1419 - 33433463-33436009 25 8.9
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 25 8.9
>04_04_1268 -
32262994-32263017,32263411-32263488,32263653-32263800,
32263890-32264127,32264210-32264420,32264499-32264680,
32264765-32264866,32265009-32266317,32266906-32266988,
32267436-32267559
Length = 832
Score = 28.7 bits (61), Expect = 0.95
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 165 CEKFNS-SPFWFGSYTEVCT-CTCPDGVDPYLGDSIS 269
C+ + S PF + +T V C CPDG +P +S S
Sbjct: 370 CDPYGSCGPFGYCDFTSVIPRCQCPDGFEPNGSNSSS 406
>07_03_1768 - 29363893-29364010,29364568-29365541
Length = 363
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 133 ARNAVFTLVPAARSLIPRRSGSEVTLRS 216
A A + AAR+++PRRSGS V++ S
Sbjct: 185 ALGAALGMKHAARAMVPRRSGSIVSVAS 212
>04_03_0703 - 18870287-18871351,18871542-18871733
Length = 418
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 142 AVFTLVPAARSLIPRRSGSEVTLRSAPVPVQTEST 246
A F PA + L+ G+ R P PV TEST
Sbjct: 137 ATFVCNPATQELVVLPPGTSGRSRRGPSPVSTEST 171
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 162 GCEKFNS-SPFWFGSYTEVCTCTCPDGVDP 248
GC ++ S P+ T V TC C DG +P
Sbjct: 80 GCGRYGSCGPYGHCDLTGVHTCKCLDGFEP 109
>02_03_0066 + 14657007-14657655,14658319-14658581
Length = 303
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1
Query: 160 PAARSLIPRRSGSEVTLRSAPVP 228
PA+RSL PRR GS RSA P
Sbjct: 47 PASRSL-PRREGSRALARSASEP 68
>05_04_0264 +
19537582-19537919,19539670-19539826,19539939-19540092,
19540281-19540417
Length = 261
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/50 (28%), Positives = 17/50 (34%)
Frame = +3
Query: 57 LLGLVALTYVNGNKVKSYICQGYYSCEKCCVHLGSGCEKFNSSPFWFGSY 206
+L L Y + +G Y C C L KFNS W Y
Sbjct: 106 ILRLKGTEYPGTGEYDKLFAEGVYECAGCGTPLYKSSTKFNSGCGWPAFY 155
>04_01_0526 -
6901003-6901056,6901070-6901404,6901423-6901607,
6902201-6904641
Length = 1004
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 132 CEKCCVHLGSGCEKFNSSPFWFGSYTEVCTCTCP 233
C +GSG FNS + G+ ++ +C CP
Sbjct: 297 CHAIVSDVGSGVCGFNSYCTFDGTRNQIASCQCP 330
>07_03_1591 + 27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 133 ARNAVFTLVPAARSLIPRRSG 195
AR AV AAR+++PRRSG
Sbjct: 1300 ARAAVAAAKHAARAMVPRRSG 1320
>06_02_0322 +
14369221-14369540,14370240-14370918,14371347-14371573,
14372121-14372312,14372394-14372550,14373860-14374093
Length = 602
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 81 YVNGNKVKSYICQGYYSCEKCCVHLGSGCEKFNSSPFW 194
Y+ GN + ++ Y + C HL G N++PFW
Sbjct: 340 YIVGNSLGGFVSL-YLAAS--CPHLVKGVTLLNATPFW 374
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 236 VWTGTGADLSVTSEPERRGIKLLAAGTKVNT 144
V TG G D +E RRG+ + AGT +T
Sbjct: 89 VTTGAGVDHIDLAECARRGVAVAGAGTVFST 119
>01_06_0247 +
27851206-27851255,27851382-27851496,27852280-27852468,
27853698-27854057,27854138-27854201,27854365-27854504,
27854610-27854918,27855135-27855389
Length = 493
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
Frame = +3
Query: 126 YSCEKCCVHL-----GSGCEKFNSS 185
Y+C K C+ L G GCEK+N S
Sbjct: 322 YACGKVCLSLLNTWPGDGCEKWNPS 346
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 235 SGQVQVQTSV*LPNQNGEELNFSQPEPR*TQH 140
SGQVQ Q+++ +P Q +LN P TQH
Sbjct: 476 SGQVQTQSAMRIPTQ---QLNHRTGNPSTTQH 504
>01_01_0757 - 5840736-5842574
Length = 612
Score = 25.8 bits (54), Expect = 6.7
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 14/73 (19%)
Frame = -1
Query: 263 GVS*IRVDSVWTGTGADL--SVTSEPERRGI------------KLLAAGTKVNTAFLATV 126
GV R+ VW G G +L S T+EP GI LLAAG +L +
Sbjct: 113 GVQFDRIFGVWLG-GVELLRSCTAEPRPNGIVWSVSKDVTRYASLLAAGNSTLAVYLGNL 171
Query: 125 VSLAYVGLHFITV 87
+ Y G++ +
Sbjct: 172 IDDQYTGVYHANI 184
>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 63 GLVALTYVNGNKVKSYICQGYYSCEKCCVHLGSGCEKFNSSPF 191
G+ L N+V+SY+ +G +S C L +G F+S F
Sbjct: 2673 GVDVLVTFAANRVESYVSEGDFS---CLARLITGVSNFHSLSF 2712
>11_01_0308 + 2307623-2307697,2308554-2308790,2310109-2310282
Length = 161
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 98 SEVLHMPRILQLREMLCSPWFRL 166
S +LH R+ ++R+ML P +RL
Sbjct: 117 SMILHQDRLRRVRQMLTRPRYRL 139
>06_03_0028 + 15659824-15661266
Length = 480
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 267 LWSLLNTGRLRLDRYRCR 214
LW+L + G +R RY CR
Sbjct: 260 LWALPDDGNVRWSRYHCR 277
>04_04_1419 - 33433463-33436009
Length = 848
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 201 SYTEVCTCTCPDGVDPY 251
+Y++ TC+CPDG P+
Sbjct: 302 TYSQGPTCSCPDGYVPH 318
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 203 TSEPERRGIKLLAAGTKVNTAFLATVVSL 117
+SE RR + L A K+N LAT +S+
Sbjct: 2490 SSEVRRRSLSRLKAAAKINNPALATHLSI 2518
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,753,058
Number of Sequences: 37544
Number of extensions: 148838
Number of successful extensions: 486
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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