Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_M20
         (343 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75535-3|CAH04733.1|  495|Caenorhabditis elegans Hypothetical pr...    28   1.5  
Z75535-2|CAA99826.1|  500|Caenorhabditis elegans Hypothetical pr...    28   1.5  
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    27   2.7  
AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical ...    27   2.7  
U97013-4|AAB52339.1|  968|Caenorhabditis elegans Alanyl trna syn...    27   3.5  
U41275-1|AAA82464.1|  237|Caenorhabditis elegans Hypothetical pr...    27   3.5  
Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical p...    27   4.7  
Z96048-6|CAE17841.1|  327|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z83238-1|CAB05792.1|  339|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z81132-15|CAE17969.1|  327|Caenorhabditis elegans Hypothetical p...    26   8.1  

>Z75535-3|CAH04733.1|  495|Caenorhabditis elegans Hypothetical
           protein F14B4.2b protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 255 FQMNYEVIADIGIH*WCSTHRFCIPFVCS*QCTRKTHIS 139
           FQ  Y+++ DIG+    +     + +VCS   TR  H++
Sbjct: 369 FQKTYQILEDIGVEMITANDCANVAYVCSLISTRAAHLT 407


>Z75535-2|CAA99826.1|  500|Caenorhabditis elegans Hypothetical
           protein F14B4.2a protein.
          Length = 500

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 255 FQMNYEVIADIGIH*WCSTHRFCIPFVCS*QCTRKTHIS 139
           FQ  Y+++ DIG+    +     + +VCS   TR  H++
Sbjct: 374 FQKTYQILEDIGVEMITANDCANVAYVCSLISTRAAHLT 412


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
            protein Y41E3.9 protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 55   SLQYMVKRKMNLLALWSKGTRYT 123
            +L Y+ K    +  LWSKGTRYT
Sbjct: 1154 ALAYLKKDWSKVDELWSKGTRYT 1176


>AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical
           protein B0212.1 protein.
          Length = 649

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +3

Query: 3   TSTMKACLVFAIFLMTVFAAVHGEE---ENESSRTLVKRDTIY 122
           TS + AC VF    +T+F+ V        +E SR L K+D I+
Sbjct: 52  TSLLTACTVFYALFLTIFSLVLELAHLLNDEESRKLNKKDIIF 94


>U97013-4|AAB52339.1|  968|Caenorhabditis elegans Alanyl trna
           synthetase protein 2 protein.
          Length = 968

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 151 NTHLGNGGSTYIVSLLTKVREDS--FSSSPCTAAKTVIRKIANTKQAFMV 8
           N +   GG  Y V +LTKV ++S  F+ S C      I  + + + +F V
Sbjct: 537 NFYAEQGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGSAEGSFSV 586


>U41275-1|AAA82464.1|  237|Caenorhabditis elegans Hypothetical
           protein T25D1.3 protein.
          Length = 237

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 155 VKHTSREWRIYVYRVPFDQSARRFIFLFTMYCSEDGHK 42
           +K T ++  + +  +  D +A+R +FL  + CS  G +
Sbjct: 151 IKETIQKMNLDISDIAMDMTAKRKLFLLKIQCSSTGRQ 188


>Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical
           protein R07E5.3 protein.
          Length = 381

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 151 FTSALLAADKRDTKAVGTAPSMDANVCD 234
           F  A+ AA  +  +A   AP +D N+CD
Sbjct: 228 FQPAITAAINQQLEASTEAPPLDVNICD 255


>Z96048-6|CAE17841.1|  327|Caenorhabditis elegans Hypothetical
           protein F57A10.6 protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +3

Query: 135 FPRCVFYECIASCRQKG--YKSGGYCTINGC 221
           F R +F + I +CRQKG   K   YC    C
Sbjct: 33  FRRALFVKNIDTCRQKGECIKKCRYCRFQKC 63


>Z83238-1|CAB05792.1|  339|Caenorhabditis elegans Hypothetical
           protein T08G3.1 protein.
          Length = 339

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 194 AFVSLLSAASNALVKHTSREWRIYVYRVPFDQSARRFIFLFTMYCS 57
           A +  L   ++ L  H S  + +Y+   PFD S      L  +YCS
Sbjct: 55  ALLEFLLYPASGLHSH-SAAYIVYINNRPFDASKEFLTVLLAVYCS 99


>Z81132-15|CAE17969.1|  327|Caenorhabditis elegans Hypothetical
           protein F57A10.6 protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +3

Query: 135 FPRCVFYECIASCRQKG--YKSGGYCTINGC 221
           F R +F + I +CRQKG   K   YC    C
Sbjct: 33  FRRALFVKNIDTCRQKGECIKKCRYCRFQKC 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,024,293
Number of Sequences: 27780
Number of extensions: 169044
Number of successful extensions: 377
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)