Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_M19
(464 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 75 3e-14
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 75 3e-14
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 75 3e-14
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 74 7e-14
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 73 9e-14
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 73 9e-14
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 73 9e-14
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 53 1e-07
01_06_1403 - 37059177-37060499,37060898-37061177,37061263-370616... 29 1.4
02_01_0043 + 300122-300907,301447-301722,302347-302481 29 2.4
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 27 7.4
04_04_0064 + 22446902-22447045,22448323-22448380,22448398-224485... 27 7.4
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 74.9 bits (176), Expect = 3e-14
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 102 LQVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFK 275
++VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 28 IEVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 87
Query: 276 KKAKNYKE 299
KKAK K+
Sbjct: 88 KKAKTTKK 95
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 96 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 74.9 bits (176), Expect = 3e-14
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 102 LQVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFK 275
++VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 28 IEVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 87
Query: 276 KKAKNYKE 299
KKAK K+
Sbjct: 88 KKAKTTKK 95
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 96 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 74.9 bits (176), Expect = 3e-14
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 102 LQVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFK 275
++VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 28 IEVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 87
Query: 276 KKAKNYKE 299
KKAK K+
Sbjct: 88 KKAKTTKK 95
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 96 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 73.7 bits (173), Expect = 7e-14
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +3
Query: 96 YKLQVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPI 269
++ VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+
Sbjct: 25 FQQPVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPV 84
Query: 270 FKKKAKNYKE 299
F KKAK K+
Sbjct: 85 FHKKAKTTKK 94
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 95 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = +3
Query: 108 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 281
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 2 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 282 AKNYKE 299
AK K+
Sbjct: 62 AKTTKK 67
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 68 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = +3
Query: 108 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 281
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 2 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 282 AKNYKE 299
AK K+
Sbjct: 62 AKTTKK 67
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 68 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = +3
Query: 108 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 281
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 2 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 282 AKNYKE 299
AK K+
Sbjct: 62 AKTTKK 67
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 68 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 301 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 402
IVL+L+C CK SQ +KRCKHF++GGDKK KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>01_06_1403 -
37059177-37060499,37060898-37061177,37061263-37061696,
37061782-37061889
Length = 714
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 183 KKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKKAKNYKENCTSSGMCRLQGEVTGG 350
+K+K + + G+ +Q+G + + +K + +CT G + GEV GG
Sbjct: 173 RKNKRKELSNGKSTAPEEQRG--DVEEIAWSQKGQQDGSDCTDDGQADMDGEVAGG 226
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 404 CPFLFLSPPSSKCLQRFRATCDLTLQSAH 318
CP F SPPSS C F ++ DL H
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDLDAAFHH 73
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +3
Query: 99 KLQVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSK 263
+L+ P + R Y + K RH+A+ + RY R+ Q Y + K
Sbjct: 244 ELKATHPHREREYSRMIGDAWNRLAADDKMVYYRHSAEDKERYKREMQEYNERLK 298
>04_04_0064 +
22446902-22447045,22448323-22448380,22448398-22448528,
22449267-22449332,22449423-22449510,22450088-22450158,
22450243-22450302,22450418-22450523,22450649-22450686,
22450990-22451082,22451156-22451220,22451633-22451645,
22451733-22451813,22452200-22452308,22452423-22452544
Length = 414
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 218 KTLRP*TTGLWWSIQTHLQKEGEKLQRKLYFVWNV 322
K L P +G +W KEG K+ Y WN+
Sbjct: 354 KKLDPTLSGSYWRRCEEATKEGGKMSGHAYGTWNI 388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,485,352
Number of Sequences: 37544
Number of extensions: 187107
Number of successful extensions: 535
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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