Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_M19
(464 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.40
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 2.8
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 4.9
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 6.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 8.6
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.0 bits (52), Expect = 0.40
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 267 IFKKKAKNYKENCTSSGMCRLQGEVTGGPEAL 362
I ++K KN +N T + ++G+V G EAL
Sbjct: 463 IIEEKRKNKNKNLTPAVNIIVKGDVAGSVEAL 494
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 251 WSIQTHLQKEGEKLQRKL 304
W +Q ++E EKL+RK+
Sbjct: 43 WLVQQEREQEYEKLKRKM 60
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.2 bits (45), Expect = 2.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 52 ILLFVYSFFNNIVRCIM 2
+++FV F NI+ CI+
Sbjct: 41 VVIFVTGFVGNIITCIV 57
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 219 RRYDRKQQGYGGQSKPIFKKK 281
R + K++ GG+ KPI KK+
Sbjct: 5 RDHWHKRRATGGKRKPIRKKR 25
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 6.5
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +1
Query: 43 IVVFVHIFSSGCISSKLYINYR*TYPNSAEHTAKNANVTKFTKCLSTKSLR 195
+ +F I + + +KLY P + T N K+ + T+SLR
Sbjct: 340 VFLFDLIGRNPTVQNKLYEETYALAPAGCDLTIDNLRKAKYLRACITESLR 390
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 195 LYYFFNLIVPCVL 207
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 195 LYYFFNLIVPCVL 207
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 195 LYYFFNLIVPCVL 207
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 195 LYYFFNLIVPCVL 207
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 195 LYYFFNLIVPCVL 207
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 195 LYYFFNLIVPCVL 207
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 263 LYYFFNLIVPCVL 275
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 263 LYYFFNLIVPCVL 275
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 40 VYSFFNNIVRCIM 2
+Y FFN IV C++
Sbjct: 232 LYYFFNLIVPCVL 244
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,108
Number of Sequences: 438
Number of extensions: 2647
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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