Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_M17
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 68 5e-12
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 68 5e-12
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 64 8e-11
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 64 8e-11
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 63 1e-10
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 63 1e-10
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 62 3e-10
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 62 3e-10
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 59 2e-09
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 59 2e-09
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 55 3e-08
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 55 3e-08
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 48 4e-06
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 48 6e-06
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 48 6e-06
Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z82057-3|CAB04860.2| 303|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 27 6.4
U64842-10|AAB37080.1| 402|Caenorhabditis elegans Hypothetical p... 27 6.4
Z81519-3|CAB04219.1| 95|Caenorhabditis elegans Hypothetical pr... 27 8.5
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 67.7 bits (158), Expect = 5e-12
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQ 179
+L + LP GL E LK D + ++ N+ + V+V +PK+K ET L+E LQ
Sbjct: 223 ALTIFLPKTRFGL---TESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 180 AMNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAF 356
++ +KK F+ D L N D LYVS+ KA I I+ SA
Sbjct: 280 SLGIKKAFDN-----DADLGNMADGLYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAM 334
Query: 357 --ISEPIIFNADHPYYYFLKGRDNIIYFTGI 443
+ EP F ADHP+++ L +DN F G+
Sbjct: 335 FVMEEPKDFTADHPFFFVL-SKDNHPLFVGL 364
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 67.7 bits (158), Expect = 5e-12
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQ 179
+L + LP GL E LK D + ++ N+ + V+V +PK+K ET L+E LQ
Sbjct: 223 ALTIFLPKTRFGL---TESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 180 AMNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAF 356
++ +KK F+ D L N D LYVS+ KA I I+ SA
Sbjct: 280 SLGIKKAFDN-----DADLGNMADGLYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAM 334
Query: 357 --ISEPIIFNADHPYYYFLKGRDNIIYFTGI 443
+ EP F ADHP+++ L +DN F G+
Sbjct: 335 FVMEEPKDFTADHPFFFVL-SKDNHPLFVGL 364
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 63.7 bits (148), Expect = 8e-11
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQ 179
+L + LP GL E LK D + ++ N+ + V+V +PK+K ET L+E LQ
Sbjct: 223 ALTIFLPKTRFGL---TESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 180 AMNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAF 356
++ +KK F+ D L N D LYVS+ KA I SA
Sbjct: 280 SLGIKKAFDN-----DADLGNMADGLYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSAR 334
Query: 357 IS--EPIIFNADHPYYYFLKGRDNIIYFTGI 443
S +PI+F ADHP+ + L ++ I F GI
Sbjct: 335 PSAIKPIVFQADHPFLFMLTQTNHPI-FLGI 364
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 63.7 bits (148), Expect = 8e-11
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQ 179
+L + LP GL E LK D + ++ N+ + V+V +PK+K ET L+E LQ
Sbjct: 223 ALTIFLPKTRFGL---TESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 180 AMNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAF 356
++ +KK F+ D L N D LYVS+ KA I SA
Sbjct: 280 SLGIKKAFDN-----DADLGNMADGLYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSAR 334
Query: 357 IS--EPIIFNADHPYYYFLKGRDNIIYFTGI 443
S +PI+F ADHP+ + L ++ I F GI
Sbjct: 335 PSAIKPIVFQADHPFLFMLTQTNHPI-FLGI 364
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQ 179
+L + LP GL E LK D + ++ N+ + V+V +PK+K ET L+E LQ
Sbjct: 223 ALTIFLPKTRFGL---TESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 180 AMNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAF 356
++ +KK F+ D L N D LYVS+ KA I I
Sbjct: 280 SLGIKKAFDN-----DADLGNMADGLYVSKVTHKALIEVDEDGTVAVAATRCSIERCRKK 334
Query: 357 ISEPIIFNADHPYYYFLKGRDNIIYFTGIFS 449
+ E I F+A+HP+++ L + I F G+F+
Sbjct: 335 MKENIEFHAEHPFFFILHHGTSYI-FLGVFT 364
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQ 179
+L + LP GL E LK D + ++ N+ + V+V +PK+K ET L+E LQ
Sbjct: 223 ALTIFLPKTRFGL---TESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 180 AMNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAF 356
++ +KK F+ D L N D LYVS+ KA I I
Sbjct: 280 SLGIKKAFDN-----DADLGNMADGLYVSKVTHKALIEVDEDGTVAVAATRCSIERCRKK 334
Query: 357 ISEPIIFNADHPYYYFLKGRDNIIYFTGIFS 449
+ E I F+A+HP+++ L + I F G+F+
Sbjct: 335 MKENIEFHAEHPFFFILHHGTSYI-FLGVFT 364
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 61.7 bits (143), Expect = 3e-10
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKKDLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQA 182
+L + LP GL + L D +++ N V++ +PK+K ET L L A
Sbjct: 232 ALSIFLPKTRFGLSEALQNL--DSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMA 289
Query: 183 MNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFI 359
+ ++K F L N D +Y+S+A KA I + S FI
Sbjct: 290 VGIEKAFTDSAD-----LSNFADGIYISQAAHKALIEVDEDGTVAAAATTISFSLTSVFI 344
Query: 360 --SEPIIFNADHPYYYFLKGRDNIIYFTGI 443
EPI F ADHP+ + L +DN F GI
Sbjct: 345 PAEEPIEFTADHPFLFIL-SKDNHPLFIGI 373
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 61.7 bits (143), Expect = 3e-10
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKKDLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQA 182
+L + LP GL + L D +++ N V++ +PK+K ET L L A
Sbjct: 232 ALSIFLPKTRFGLSEALQNL--DSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMA 289
Query: 183 MNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFI 359
+ ++K F L N D +Y+S+A KA I + S FI
Sbjct: 290 VGIEKAFTDSAD-----LSNFADGIYISQAAHKALIEVDEDGTVAAAATTISFSLTSVFI 344
Query: 360 --SEPIIFNADHPYYYFLKGRDNIIYFTGI 443
EPI F ADHP+ + L +DN F GI
Sbjct: 345 PAEEPIEFTADHPFLFIL-SKDNHPLFIGI 373
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 58.8 bits (136), Expect = 2e-09
Identities = 36/133 (27%), Positives = 64/133 (48%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKKDLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQA 182
+L + LP + GL EK+ + ++ ++ ++ V V +PKFK E +LKE L+A
Sbjct: 218 TLAIFLPKQRFGLVDALEKINGEY--IQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEA 275
Query: 183 MNVKKLFEPGQARLDXLLKNGGDLYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFIS 362
+ +K++F G A L + +++S + KA I F + ++
Sbjct: 276 IGIKEIFAEG-ADLSGI---ADKVFISSGIHKAIIEVDEDGTTAAAASAFKVQLEMMIMA 331
Query: 363 EPIIFNADHPYYY 401
EP F ADHP+ +
Sbjct: 332 EPTQFVADHPFLF 344
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 58.8 bits (136), Expect = 2e-09
Identities = 36/133 (27%), Positives = 64/133 (48%)
Frame = +3
Query: 3 SLLVVLPNKIDGLHALEEKLKKDLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQA 182
+L + LP + GL EK+ + ++ ++ ++ V V +PKFK E +LKE L+A
Sbjct: 218 TLAIFLPKQRFGLVDALEKINGEY--IQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEA 275
Query: 183 MNVKKLFEPGQARLDXLLKNGGDLYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFIS 362
+ +K++F G A L + +++S + KA I F + ++
Sbjct: 276 IGIKEIFAEG-ADLSGI---ADKVFISSGIHKAIIEVDEDGTTAAAASAFKVQLEMMIMA 331
Query: 363 EPIIFNADHPYYY 401
EP F ADHP+ +
Sbjct: 332 EPTQFVADHPFLF 344
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 55.2 bits (127), Expect = 3e-08
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = +3
Query: 12 VVLPNKIDGL-HALEEKLKKDLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQAMN 188
V LP + L AL++ +K + L + ++ + N LPKF E NLK LQ +
Sbjct: 223 VFLPKLRNSLKEALKKLNEKRFNDLLKTKKRTFMN---TQLPKFTIEKDLNLKSHLQTLG 279
Query: 189 VKKLFEPGQARLDXLLKNGGDLYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFISEP 368
+ +F A L L +N L +SE V KA I +SA + +P
Sbjct: 280 ITDIFSDS-ADLSGLAEN---LKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMSARMEQP 335
Query: 369 IIFNADHPYYYFLKGRDNIIYFTGIFS 449
+ F ADHP+++ + ++ I F G+F+
Sbjct: 336 VNFIADHPFFFTITFLNHPI-FVGVFN 361
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 55.2 bits (127), Expect = 3e-08
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = +3
Query: 12 VVLPNKIDGL-HALEEKLKKDLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQAMN 188
V LP + L AL++ +K + L + ++ + N LPKF E NLK LQ +
Sbjct: 223 VFLPKLRNSLKEALKKLNEKRFNDLLKTKKRTFMN---TQLPKFTIEKDLNLKSHLQTLG 279
Query: 189 VKKLFEPGQARLDXLLKNGGDLYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFISEP 368
+ +F A L L +N L +SE V KA I +SA + +P
Sbjct: 280 ITDIFSDS-ADLSGLAEN---LKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMSARMEQP 335
Query: 369 IIFNADHPYYYFLKGRDNIIYFTGIFS 449
+ F ADHP+++ + ++ I F G+F+
Sbjct: 336 VNFIADHPFFFTITFLNHPI-FVGVFN 361
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 48.0 bits (109), Expect = 4e-06
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 117 VDVYLPKFKCETTTNLKEVLQAMNVKKLFEPGQARLDXLLKNGGD-LYVSEAVQKAFIXX 293
V++ +PK+K ET L L A+ ++K F L N D +Y+S+A KA I
Sbjct: 9 VNIAMPKWKIETALGLNRGLMAVGIEKAFTDSAD-----LSNFADGIYISQAAHKALIEV 63
Query: 294 XXXXXXXXXXXXFGITYLSAFISE-PIIFNADHPYYYFLKGRDNIIYFTGI 443
+ S +E PI F ADHP+ + L +DN F G+
Sbjct: 64 DEDGTVAAAATTISSSVGSVQRTEKPIEFTADHPFLFIL-SKDNHPLFIGV 113
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 47.6 bits (108), Expect = 6e-06
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Frame = +3
Query: 45 ALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQAMNVKKLFEPGQAR 221
AL E LK + + N+Y + + PKFK + NLK L + +LF QA
Sbjct: 236 ALAENLKSLNAAKFHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTE-QAD 294
Query: 222 LDXLLKNGGDLYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFISEPIIFNADHPYYY 401
L + G L ++ A +A I I + SA EP+ DHP+ +
Sbjct: 295 LSGI---GPGLQLASATHQALIEVDQVGTRAAAATEAKIFFTSASSDEPLHIRVDHPFLF 351
Query: 402 FLKGRDNIIYFTGIFS 449
+ +DN F G ++
Sbjct: 352 AII-KDNSPLFLGTYT 366
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 47.6 bits (108), Expect = 6e-06
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Frame = +3
Query: 45 ALEEKLKK-DLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQAMNVKKLFEPGQAR 221
AL E LK + + N+Y + + PKFK + NLK L + +LF QA
Sbjct: 236 ALAENLKSLNAAKFHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTE-QAD 294
Query: 222 LDXLLKNGGDLYVSEAVQKAFIXXXXXXXXXXXXXXFGITYLSAFISEPIIFNADHPYYY 401
L + G L ++ A +A I I + SA EP+ DHP+ +
Sbjct: 295 LSGI---GPGLQLASATHQALIEVDQVGTRAAAATEAKIFFTSASSDEPLHIRVDHPFLF 351
Query: 402 FLKGRDNIIYFTGIFS 449
+ +DN F G ++
Sbjct: 352 AII-KDNSPLFLGTYT 366
>Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical
protein C34E11.1 protein.
Length = 483
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 222 LDXLLKNGGDLYVSEAVQKAF 284
LD LLKNG + +V EA +KA+
Sbjct: 106 LDYLLKNGSERFVQEAREKAY 126
>Z82057-3|CAB04860.2| 303|Caenorhabditis elegans Hypothetical
protein T26H8.2 protein.
Length = 303
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 390 PYYYFLKGRDNIIYFTGIFSS*IFRSQENTNTIIW 494
P +YF D +++ +FS+ F + +TI+W
Sbjct: 137 PSFYFYVYNDCKLFYNEVFSAFFFTRSPSCSTIVW 171
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 369 IIFNADHPYYYFLKGRDNIIYFTGIFSS*IFRSQENTNTIIWKINSKICIR 521
+I + DHP + ++ DN YF + I Q + N I NS +CI+
Sbjct: 82 LINHGDHPVAFEVQTTDNYSYFIDVVHGIIPPRQTSVNAAIRMPNS-VCIQ 131
>U64842-10|AAB37080.1| 402|Caenorhabditis elegans Hypothetical
protein F25B4.1 protein.
Length = 402
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 372 IFNADHPYYYFLKGRDNIIYFTGIFSS*IFRSQENTNTIIWKINSKICIRD 524
+F+ H ++ G+D + + + ++ + QEN+ T+ N K I+D
Sbjct: 71 LFDVSHMLQTYITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKD 121
>Z81519-3|CAB04219.1| 95|Caenorhabditis elegans Hypothetical
protein F29C12.6 protein.
Length = 95
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 27 KIDGLHALEEKLKKDLSVLERAQQNMYTNEVDVYLPKFKCETTTNLKEVLQAMNVKKLFE 206
+++ LH+LE+K + L+ E Q TN+ + Y +F T + + + L E
Sbjct: 17 EVEKLHSLEQKCLQGLANHEMNFQQNVTNKPESYEQQFAKTTRDAMVSTYSFLYLNNLKE 76
Query: 207 PGQARLDXLLKNGGDL 254
L + K DL
Sbjct: 77 EKTIELQGIEKRMQDL 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,595,960
Number of Sequences: 27780
Number of extensions: 168271
Number of successful extensions: 536
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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