Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_M16
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z70035-6|CAA93866.1|  444|Caenorhabditis elegans Hypothetical pr...    32   0.26 
Z70035-8|CAA93868.2|  446|Caenorhabditis elegans Hypothetical pr...    32   0.34 
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    32   0.34 
Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z54342-7|CAA91149.1|  460|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z47745-4|CAA87665.2|  445|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z49130-7|CAA88972.2|  316|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z47745-2|CAA87664.1|  407|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AF537097-1|AAN60468.1|  110|Caenorhabditis elegans PHF-5 protein.      27   7.4  
AF537096-1|AAN60467.1|  110|Caenorhabditis elegans PHF-5 protein.      27   7.4  
AF026152-1|AAB81847.1|  117|Caenorhabditis elegans chitinase pro...    27   7.4  
AC026301-14|AAP13738.1|  110|Caenorhabditis elegans Phd finger f...    27   7.4  
Z37983-2|CAA86055.1|  585|Caenorhabditis elegans Hypothetical pr...    27   9.7  
L10986-9|AAK93847.2|  808|Caenorhabditis elegans Spindle assembl...    27   9.7  
AJ539470-1|CAD62434.1|  808|Caenorhabditis elegans SAS-4 protein...    27   9.7  

>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 390 GDDDPKDPQKSNLSLESPQARTAGTNSALLLAEQYGFDGIDLSWQLP 530
           GDD+  +  K    L SP  R    N+     + YG DGIDL W+ P
Sbjct: 79  GDDNSNNFYKV---LNSPNRRKVFLNATTSFLQIYGIDGIDLFWKWP 122


>Z70035-6|CAA93866.1|  444|Caenorhabditis elegans Hypothetical
           protein R09D1.6 protein.
          Length = 444

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 390 GDDDPKDPQKSNLSLESPQARTAGTNSALLLAEQYGFDGIDLSWQLPKRIPHNIRS 557
           G +D  +  K  LS  SP  +    NS +   + Y  DG+DL W+ P +   +I S
Sbjct: 153 GGNDNSNNFKPGLS--SPDRKKLFINSTVSFLQTYDIDGVDLYWKWPGKTSKDIYS 206


>Z70035-8|CAA93868.2|  446|Caenorhabditis elegans Hypothetical
           protein R09D1.8 protein.
          Length = 446

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 432 LESPQARTAGTNSALLLAEQYGFDGIDLSWQLPKRIPHNIRS 557
           L SP  +    NS +   + Y  DG+DL W+ P +   +I S
Sbjct: 167 LSSPDRKKLFINSTVSFLQTYDIDGVDLYWKWPGKTSKDIYS 208


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 438 SPQARTAGTNSALLLAEQYGFDGIDLSWQLP 530
           S  +R    +SA+     +GFDGID+ W+ P
Sbjct: 151 SSASRKVFIDSAITFVRTWGFDGIDIDWEYP 181


>Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical
           protein R09D1.10 protein.
          Length = 450

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 432 LESPQARTAGTNSALLLAEQYGFDGIDLSWQLPK 533
           + SP  +    NS +   ++Y  DG+DL W+ P+
Sbjct: 163 ISSPDRKKIFINSIVSFLKKYDIDGVDLFWKWPR 196


>Z54342-7|CAA91149.1|  460|Caenorhabditis elegans Hypothetical
           protein C08H9.12 protein.
          Length = 460

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 447 ARTAGTNSALLLAEQYGFDGIDLSWQLPKRIPHN 548
           +R   TNS +   + Y  DG+D+ W  PK    N
Sbjct: 198 SRNLFTNSIVSFVQNYDIDGVDIFWTWPKYSDEN 231


>Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical
           protein T13H5.3 protein.
          Length = 626

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 486 EQYGFDGIDLSWQLP 530
           ++YGFDG+D+ W+ P
Sbjct: 131 KEYGFDGVDIDWEYP 145


>Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical
           protein C08H9.4b protein.
          Length = 465

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 447 ARTAGTNSALLLAEQYGFDGIDLSWQLPK 533
           +RT   NS +   E+Y  DGI++ W  P+
Sbjct: 203 SRTVFVNSIVSFVEKYDIDGIEMFWMWPR 231


>Z47745-4|CAA87665.2|  445|Caenorhabditis elegans Hypothetical
           protein T19H5.1 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 432 LESPQARTAGTNSALLLAEQYGFDGIDLSWQLP 530
           +ES   R    NS L   ++   DGIDL W+ P
Sbjct: 153 IESEYRRQIFINSILTFLKENDLDGIDLFWEWP 185


>Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical
           protein ZK938.6 protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 ARTAGTNSALLLAEQYGFDGIDLSWQLPKRIPHN 548
           +R    NS       Y  DG+D+ W  PK    N
Sbjct: 198 SRNLFVNSIATFVRDYDIDGVDIFWTWPKHSDEN 231


>Z49130-7|CAA88972.2|  316|Caenorhabditis elegans Hypothetical
           protein T06D8.9 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 447 ARTAGTNSALLLAEQYGFDGIDLSWQLPKRIPHNI 551
           A+ A T   +  A Q GFDG D+ W+    +PH++
Sbjct: 65  AKGAFTPKVVQCANQ-GFDGSDVQWRCDADLPHDM 98


>Z47745-2|CAA87664.1|  407|Caenorhabditis elegans Hypothetical
           protein T19H5.3 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 426 LSLESPQARTAGTNSALLLAEQYGFDGIDLSWQLPK 533
           L +  P+ +     S + + E+Y  DG+DL W+  K
Sbjct: 157 LVIADPRRKRRFFKSIISILEEYQLDGVDLLWKWAK 192


>AF537097-1|AAN60468.1|  110|Caenorhabditis elegans PHF-5 protein.
          Length = 110

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
 Frame = -3

Query: 577 CQKDPILERILCGILFGNCQDRSIPSKPYCSAR-RRAELVPAVRAC--GDSNERLDFCGS 407
           C+K P    I  G L   C  R +     C +  R   LV     C  G    R   CG 
Sbjct: 11  CRKQP---GIAIGRLCEKCDGRCV----ICDSHVRPCTLVRICEECNYGSYQGRCVICGG 63

Query: 406 LGSSSPHHCQEHVLLRK 356
            G S  ++C+E  +L K
Sbjct: 64  AGVSDAYYCKECTILEK 80


>AF537096-1|AAN60467.1|  110|Caenorhabditis elegans PHF-5 protein.
          Length = 110

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
 Frame = -3

Query: 577 CQKDPILERILCGILFGNCQDRSIPSKPYCSAR-RRAELVPAVRAC--GDSNERLDFCGS 407
           C+K P    I  G L   C  R +     C +  R   LV     C  G    R   CG 
Sbjct: 11  CRKQP---GIAIGRLCEKCDGRCV----ICDSHVRPCTLVRICEECNYGSYQGRCVICGG 63

Query: 406 LGSSSPHHCQEHVLLRK 356
            G S  ++C+E  +L K
Sbjct: 64  AGVSDAYYCKECTILEK 80


>AF026152-1|AAB81847.1|  117|Caenorhabditis elegans chitinase
           protein.
          Length = 117

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 438 SPQARTAGTNSALLLAEQYGFDGIDLSW 521
           S  +R    +SA      +GFDGIDL W
Sbjct: 90  SSASRKVFIDSATTSVRTWGFDGIDLDW 117


>AC026301-14|AAP13738.1|  110|Caenorhabditis elegans Phd finger
           family protein 5 protein.
          Length = 110

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
 Frame = -3

Query: 577 CQKDPILERILCGILFGNCQDRSIPSKPYCSAR-RRAELVPAVRAC--GDSNERLDFCGS 407
           C+K P    I  G L   C  R +     C +  R   LV     C  G    R   CG 
Sbjct: 11  CRKQP---GIAIGRLCEKCDGRCV----ICDSHVRPCTLVRICEECNYGSYQGRCVICGG 63

Query: 406 LGSSSPHHCQEHVLLRK 356
            G S  ++C+E  +L K
Sbjct: 64  AGVSDAYYCKECTILEK 80


>Z37983-2|CAA86055.1|  585|Caenorhabditis elegans Hypothetical
           protein B0393.2 protein.
          Length = 585

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -3

Query: 427 RLDFCGSLGSSSPHHCQEHVLLRKLSFKVSDRSIISVRPINVQILSE*NHLI 272
           R+   GSL SSS       ++LR L ++ SD  I   R  N+    + NHLI
Sbjct: 33  RVAASGSLRSSSCRSAVWRLVLRCLPYETSDWEISLSRSRNLYRAHKENHLI 84


>L10986-9|AAK93847.2|  808|Caenorhabditis elegans Spindle assembly
           abnormal protein 4 protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 420 SNLSLESPQARTAGTNSALLLAEQYGFDGIDL 515
           S +SLE+PQAR  G+N    L       GI L
Sbjct: 231 SGISLETPQARPLGSNRINQLVRSEAQTGISL 262


>AJ539470-1|CAD62434.1|  808|Caenorhabditis elegans SAS-4 protein
           protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 420 SNLSLESPQARTAGTNSALLLAEQYGFDGIDL 515
           S +SLE+PQAR  G+N    L       GI L
Sbjct: 231 SGISLETPQARPLGSNRINQLVRSEAQTGISL 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,574,052
Number of Sequences: 27780
Number of extensions: 243117
Number of successful extensions: 699
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)