Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_M12
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   5.6  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   5.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 245 KCVSFLRQEQKEMIFDLSTEDLRCGLMGELNDD 147
           KC      E K+ + D+  +D++  L   +NDD
Sbjct: 283 KCSMITTPEIKKEVEDMEYDDIKTELSTGMNDD 315


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 357 GMKKEEVPAARLIALEQDMAKYKPTTDELSAXAVEEFVQS 476
           GMK+E V   R    E+D ++ + T+   S   +E  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 357 GMKKEEVPAARLIALEQDMAKYKPTTDELSAXAVEEFVQS 476
           GMK+E V   R    E+D ++ + T+   S   +E  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 287 VVLSDWFQFFYILFKCVSFLRQEQKE 210
           V +  W QF Y L    SF ++ Q+E
Sbjct: 421 VWIPKWRQFLYCLAGDESFRKRRQRE 446


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = +3

Query: 3   DEKVTSELEA--KEGDVVLFK-NFEENRVKYDGEAFDEDLFKSWVFVQSMPVIVEFSHET 173
           DE V S +E   K+ +VV    NF E   +   +A  +D     + V+  P+     H  
Sbjct: 56  DENVQSYVECMMKKFNVVDENGNFNEKNTRDIVQAVLDDNETDQLIVECSPISDANVHIK 115

Query: 174 ASKIFGGQIKY 206
            SKIF   +KY
Sbjct: 116 ISKIFQCFMKY 126


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 394 SLSNKTWLSTNRPPMSLAL 450
           S +NKTWL  N    SL L
Sbjct: 437 SQTNKTWLPVNENYKSLNL 455


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = -1

Query: 591 CQRRSHRSWWRLK 553
           CQ   ++ WW +K
Sbjct: 359 CQNEMNKWWWNMK 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,359
Number of Sequences: 438
Number of extensions: 2912
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)