Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_M09
         (63 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   4.2  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    18   9.7  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    18   9.7  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    18   9.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 52  NDTRNKINEHHIK 14
           + T NKIN H  K
Sbjct: 442 DSTMNKINNHEYK 454


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 2   SSYIFYMMFVYFIP 43
           S  + Y ++VYF+P
Sbjct: 215 SYLVCYGIWVYFVP 228


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
          homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 35 NKRTSYKKYN 6
          N+RT +KK N
Sbjct: 58 NRRTKWKKQN 67


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 2   SSYIFYMMFVYFIP 43
           S  + Y ++VYF+P
Sbjct: 91  SYLVCYGIWVYFVP 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,669
Number of Sequences: 438
Number of extensions: 210
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 2
effective length of database: 145,467
effective search space used:  2618406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)