Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_M07
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    29   0.056
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   2.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   2.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.9  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   6.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   8.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.5  

>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 0.056
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 486 SALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYYS 605
           S+LSN   ++ ++  ++ Y++ YN Y+  +  N    YY+
Sbjct: 316 SSLSNKTIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYN 355


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 486 SALSNGGTYSASDSQSSRYHSGYN 557
           S+LSN   YS  ++ ++ Y++ YN
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNNNYN 106


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 486 SALSNGGTYSASDSQSSRYHSGYN 557
           S+LSN   YS  ++ ++ Y++ YN
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNNNYN 106


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 325 LVVYSLLLIQKVFTGRVIMI*VTSKVAISKKAFLLM 432
           +V YS+L+I        ++I +T +  +SK    +M
Sbjct: 41  IVFYSVLMIISAIGNTTVLILITCRKRVSKSRIHIM 76


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 600  NRCV-LNLWKTVLNIRCIHCDILSFENHWRCKFRRYL 493
            NR V   +W+  LN R +   + S     RCKF + L
Sbjct: 900  NRLVTFPVWQVTLNARLVELSLGSNPWSCRCKFLQEL 936


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 240 CARVQNSLPYFPSEHHKSQIYFLHPRNF 157
           CA ++ ++P FP       ++FL P  F
Sbjct: 193 CAMLKENMPEFPLYQLSCILFFLIPMVF 220


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 32  LIYSNITVKRRYGALTAFSCD-ISFSCGKT*TVPRKRRFP 148
           L++S    K+R   +T F  D ++ +C K    P KRR P
Sbjct: 370 LLFSKYDAKKRNFFITMFDLDFLTNACKKKDDKP-KRRLP 408


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 486 SALSNGGTYSASDSQSSRYHSGYNGYS 566
           S+LSN   YS  ++ ++  ++ YN Y+
Sbjct: 316 SSLSNNYKYSNYNNYNNYNNNNYNNYN 342


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 525 SQSSRYHSGYNGYSGQSSTN 584
           S +  Y++ YN Y+   +TN
Sbjct: 89  SNNYNYNNNYNNYNNNYNTN 108


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 471 YNTQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNS 587
           + T S  +S+   YS  D +  R       Y G SST S
Sbjct: 283 WRTPSVVVSDYSDYSYLDEKLERNDLDLEKYEGISSTPS 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,854
Number of Sequences: 438
Number of extensions: 3857
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)