Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_M05
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0216 + 15804110-15804284,15804341-15804351                       30   1.8  
06_03_0795 - 24683023-24683155,24685853-24686057,24686275-246864...    30   1.8  
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304...    29   4.1  
03_05_0517 - 25118232-25118730,25119002-25119273                       28   5.4  
03_02_0269 + 7001891-7002212,7003598-7004037                           28   5.4  
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608...    27   9.4  
02_01_0511 - 3706123-3706166,3706436-3706492,3706734-3706818,370...    27   9.4  

>12_02_0216 + 15804110-15804284,15804341-15804351
          Length = 61

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -3

Query: 374 SGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAF 252
           SG P+    +H V      FF+  SN  SGNY   + G  F
Sbjct: 12  SGSPAPPYKNHTVAGADGWFFNATSNTTSGNYSDWAAGETF 52


>06_03_0795 -
           24683023-24683155,24685853-24686057,24686275-24686443,
           24686590-24686775,24686916-24687124,24687197-24687362
          Length = 355

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 347 HYCRPMEHHYCPPRELCLRQPW 412
           HYCR +E+ YC  + L  R+ W
Sbjct: 181 HYCRSIENWYCLSKTLAEREAW 202


>01_06_0486 -
           29729333-29729356,29729856-29730106,29730364-29730466,
           29730571-29730663,29730773-29730905,29731184-29731272,
           29731385-29731553,29731930-29732016,29732388-29732506,
           29732554-29732706
          Length = 406

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 426 EEKHESFHCRIVSELSPRAEFGTRQKHG*G 515
           +E H SF+C  V E+S RA F  R   G G
Sbjct: 326 QEGHRSFYCPTVREISGRAHFRCRLCGGKG 355


>03_05_0517 - 25118232-25118730,25119002-25119273
          Length = 256

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 323 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRY 213
           D FF++    P GN     T P  VD   P  P + +
Sbjct: 37  DWFFTRKGESPQGNISKEETAPTGVDVTDPGRPGRAF 73


>03_02_0269 + 7001891-7002212,7003598-7004037
          Length = 253

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 188 SHHGREGCRIAWVDNWDD*NRR 253
           + H R+  R+AW D W D +R+
Sbjct: 62  TEHARQRMRVAWADGWVDGSRK 83


>11_04_0321 -
           16359390-16359539,16359674-16359746,16360448-16360845,
           16360919-16362673,16362751-16362861,16363745-16363962,
           16364088-16364196
          Length = 937

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 230 YPPKRYDNPLARGGK 186
           YPPKRY NP+   G+
Sbjct: 859 YPPKRYSNPVGPAGR 873


>02_01_0511 -
           3706123-3706166,3706436-3706492,3706734-3706818,
           3707424-3707472,3707566-3707639,3707775-3707849,
           3708186-3708240,3708318-3708391,3708607-3708753,
           3709419-3709493,3709527-3709648,3709749-3709929
          Length = 345

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 472 LLVPNSARGRNMAEVDETLKKKRTFRKFYLPRSRFRST 585
           LL+P +A     AE+  ++KKK+      LP S  RST
Sbjct: 49  LLLPRAAGKNQQAELAVSVKKKKIGDSVELPCSNVRST 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,510,469
Number of Sequences: 37544
Number of extensions: 308557
Number of successful extensions: 723
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)