Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_M05
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U41535-3|AAB63403.2|  266|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   6.4  

>Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical
           protein T06E4.8 protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -3

Query: 338 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 222
           V A P P F+ P+  P     PI  GPAF     P   P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148


>U41535-3|AAB63403.2|  266|Caenorhabditis elegans Hypothetical
           protein F18A1.7 protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 363 WNT-TIVHHVNSVCGSHGQYGEEEKHESF--HCRIVSELSPRAEFGTRQKH 506
           WN   +VH    VCG H Q     K E +  H ++ ++ S   E+    KH
Sbjct: 71  WNMKNVVHQARKVCGHHAQAITCLKKEQYCDHNKLFAKASSSVEYMCATKH 121


>Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical
           protein T06E4.9 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 338 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 222
           V A P P F+ P+  P     P+  GPAF     P   P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 HHVNSVCGSHGQYGEEEKHESFHCRIVSELSPRAEFGTRQKH 506
           HH  +  G HG++G    H   H    +      E GT   H
Sbjct: 510 HHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGH 551


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,372,249
Number of Sequences: 27780
Number of extensions: 268931
Number of successful extensions: 705
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)