Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_M04
(560 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 146 1e-36
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 91 8e-20
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 89 4e-19
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 84 1e-17
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 84 2e-17
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 70 3e-13
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 68 8e-13
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 67 1e-12
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 66 4e-12
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 66 4e-12
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 57 2e-09
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 57 2e-09
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 54 1e-08
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 53 3e-08
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 52 6e-08
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 49 5e-07
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 48 1e-06
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 47 2e-06
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 47 2e-06
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 40 3e-04
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 38 0.001
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 36 0.005
SPCC132.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 28 0.82
SPCC1259.03 |rpa12||DNA-directed RNA polymerase complex I subuni... 26 3.3
SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr... 26 3.3
SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF... 25 5.8
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 25 5.8
SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit T... 25 5.8
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 25 7.6
SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr 1|||... 25 7.6
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 25 7.6
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 146 bits (355), Expect = 1e-36
Identities = 75/181 (41%), Positives = 100/181 (55%)
Frame = +1
Query: 1 LYEILGVSRNASESEIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDK 180
LYE+L V AS++E+K++Y KLA ++HPDKNP AGDKFKEIS AYE+L+D +KR TYD+
Sbjct: 7 LYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYDR 66
Query: 181 YXXXXXXXXXXXXXFPADDLFGHFFGDIFXXXXXXXXXXXXXXEDTMHPLKVTLEDMYMG 360
+ ADDLF FFG +D +H +KVTLED+Y G
Sbjct: 67 FGEEGLQGGGADGGMSADDLFASFFGG--GMFGGGMPRGPRKGKDLVHTIKVTLEDLYRG 124
Query: 361 KTTKLQLSKNXXXXXXXXXXXXXXSAVTCEYCHGQGIRVSYQQIAPQMTRQFQQRCPVCE 540
KTTKL L K S +C C+G G++ + + P M ++ Q CP C
Sbjct: 125 KTTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGP-MIQRMQMTCPDCN 183
Query: 541 G 543
G
Sbjct: 184 G 184
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 91.5 bits (217), Expect = 8e-20
Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 9/190 (4%)
Frame = +1
Query: 1 LYEILGVSRNASESEIKRSYHKLAKEFHPDKNP-----AAGDKFKEISYAYEVLSDPKKR 165
LY+IL V AS EIK+SY +LA HPDK P A ++F+ + AY++L DP+ R
Sbjct: 7 LYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESR 66
Query: 166 QTYDKYXXXXXXXXXXXXXFPADDLFGHFFGDIFXX---XXXXXXXXXXXXEDTMHPLKV 336
+ YD Y DD+ FG F D +H ++
Sbjct: 67 EMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDVIHDYEI 126
Query: 337 TLEDMYMGKTTKLQLSKNXX-XXXXXXXXXXXXSAVTCEYCHGQGIRVSYQQIAPQMTRQ 513
+LEDM+ GK KL+ ++N C C G+G++ + + P
Sbjct: 127 SLEDMFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVGPHHVTN 186
Query: 514 FQQRCPVCEG 543
Q C C G
Sbjct: 187 SQVICDTCNG 196
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 89.0 bits (211), Expect = 4e-19
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Frame = +1
Query: 7 EILGVSRNASESEIKRSYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQTYD 177
+ILGVS++ASESEI+++Y +L K++HPDKNP A +KF EI+ A+EVLSDP++R+ YD
Sbjct: 10 QILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYD 69
Query: 178 KYXXXXXX------XXXXXXXFPAD----DLFGHFFGDIFXXXXXXXXXXXXXXEDTMHP 327
Y FP D FG F +IF + +
Sbjct: 70 AYGEEGLNGQPGGPGGGPGEGFPGGGFGFDPFGDIFDNIFGGRRRQNAVRRGPSMEQI-- 127
Query: 328 LKVTLEDMYMGKTTKLQLS-KNXXXXXXXXXXXXXXSA----VTCEYCHGQGIRVSYQQI 492
+++ L Y G + L++ K SA +C C G G RV I
Sbjct: 128 VQIHLSSFYTGGSFTLEIPVKRTCSVCSGQGFNPKYSADKAIESCPVCGGSGFRVIEHMI 187
Query: 493 APQMTRQFQQRCPVCEGH 546
AP +Q + C C G+
Sbjct: 188 APGFRQQMRMPCNACNGN 205
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKNP--AAGDKFKEISYAYEVLSDPKKRQTYD 177
Y+ LGVS++AS SEIK +Y+KLAK++HPD NP AA DKF EI AYEVL DPKK++ +D
Sbjct: 88 YKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKAFD 147
Query: 178 KY 183
Y
Sbjct: 148 TY 149
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 83.8 bits (198), Expect = 2e-17
Identities = 37/61 (60%), Positives = 48/61 (78%)
Frame = +1
Query: 1 LYEILGVSRNASESEIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDK 180
LY+ L V ASE+E+K++Y KLA ++HPDKNP KFKEIS AYEVLSDP++R+ YD+
Sbjct: 7 LYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQ 66
Query: 181 Y 183
Y
Sbjct: 67 Y 67
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 69.7 bits (163), Expect = 3e-13
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKNP----AAGDKFKEISYAYEVLSDPKKRQT 171
Y++LG+S +A+ +IK++Y KLA ++HPDKNP A +KF++IS AY+VL D K R
Sbjct: 10 YDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQ 69
Query: 172 YDKY 183
YD++
Sbjct: 70 YDQF 73
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 68.1 bits (159), Expect = 8e-13
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYD 177
YEIL + + +++EIK+SY KLA + HPDKN P+A + FK +S A++VLSDP R YD
Sbjct: 115 YEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYD 174
Query: 178 K 180
+
Sbjct: 175 R 175
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 67.3 bits (157), Expect = 1e-12
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQTY 174
Y+ILGVS+ A++ EIK++Y KLA +HPDKN A +FKE+ AY +LSDP+ R+ +
Sbjct: 351 YKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRF 410
Query: 175 D 177
D
Sbjct: 411 D 411
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 65.7 bits (153), Expect = 4e-12
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Frame = +1
Query: 1 LYEILGVSRNASESEIKRSYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKKR 165
LY LG+ ++A+ +IK SY++L++ FHPD++ A A +KF+ I +AYEVLSDP K+
Sbjct: 9 LYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKK 68
Query: 166 QTYDKY 183
+ YD +
Sbjct: 69 EIYDNF 74
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 65.7 bits (153), Expect = 4e-12
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKN----PAAGDKFKEISYAYEVLSDPKKRQT 171
Y+IL +S +A IK+SY +LA +HPDKN AA +KF++++ AY+VLSDPK R+
Sbjct: 11 YDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREK 70
Query: 172 YDK 180
YDK
Sbjct: 71 YDK 73
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 56.8 bits (131), Expect = 2e-09
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKN---PAAGDKFKEISYAYEVLSDPKKRQTY 174
YE+LG++ +A + EI R++ K + ++HPDKN P A +KF + AY L D + R+ Y
Sbjct: 11 YELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAY 70
Query: 175 D 177
D
Sbjct: 71 D 71
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 56.8 bits (131), Expect = 2e-09
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKKRQTY 174
YEIL V+ ++ EIK +Y KLA ++HPD+NP D F +I+ AY +LS+ KR+ +
Sbjct: 11 YEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWH 70
Query: 175 DK 180
+K
Sbjct: 71 EK 72
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 54.4 bits (125), Expect = 1e-08
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPD------KNPAAGDKFKEISYAYEVLSDPKKR 165
Y +LGV ++AS+ I+R+Y K A + HPD K A +F +++ AY VLSD K+R
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 166 QTYDK 180
+ YDK
Sbjct: 93 KHYDK 97
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 53.2 bits (122), Expect = 3e-08
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKNPA----AGDKFKEISYAYEVLSDPKKRQT 171
Y IL + +NA+ +I++ Y LA ++HPD+NP A +F+ + A+EVLSD KR
Sbjct: 14 YAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLI 73
Query: 172 YDK 180
YD+
Sbjct: 74 YDQ 76
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 52.0 bits (119), Expect = 6e-08
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKNPAAG----DKFKEISYAYEVLSDPKKRQT 171
Y ILG +S EI++ Y KL +HPD+NP +F+ I A+EVL DPK R+
Sbjct: 14 YTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLREL 73
Query: 172 YDK 180
+D+
Sbjct: 74 FDQ 76
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 48.8 bits (111), Expect = 5e-07
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDK-NPA----AGDKFKEISYAYEVLSDPKKRQ 168
Y IL ++ AS EIK +Y K A E HPD+ +P+ A ++F+ ++ AY VLSD +R
Sbjct: 6 YAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRA 65
Query: 169 TYDK 180
YD+
Sbjct: 66 QYDR 69
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 47.6 bits (108), Expect = 1e-06
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDK-----NPAAGDKFK---EISYAYEVLSDPK 159
YEILG+++ S +++R Y +L+ +FHPDK N + K EI+ AY L+D K
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159
Query: 160 KRQTYDKY 183
R+ Y Y
Sbjct: 160 TRENYALY 167
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 46.8 bits (106), Expect = 2e-06
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Frame = +1
Query: 4 YEILGVSR---NASESEIKRSYHKLAKEFHPDKNPAAGDK-----FKEISYAYEVLSDPK 159
Y +LG+S+ A +IK+++ K + HPDK A+G+ FK I AYE+LSDP
Sbjct: 99 YAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPV 158
Query: 160 KRQTYD 177
+R+ +D
Sbjct: 159 RRRQFD 164
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 46.8 bits (106), Expect = 2e-06
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKY 183
YE+L V AS EI R+Y K + +HPDKNP + + + + +L + + R+ YD +
Sbjct: 42 YELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKELYTLLGLIVNILRNTETRKRYDYF 101
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +1
Query: 4 YEILGVS--RNASESEIKRSYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQ 168
Y +L + + ++ EIK +Y K FHPDK P+ ++ AY+VLS K RQ
Sbjct: 4 YSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQ 63
Query: 169 TY 174
Y
Sbjct: 64 QY 65
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 37.9 bits (84), Expect = 0.001
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 16/76 (21%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDK----------------NPAAGDKFKEISYA 135
YEIL + R + ++IKR Y +L K+ HPDK N + F+ + A
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAA 93
Query: 136 YEVLSDPKKRQTYDKY 183
+LSD ++R+ YD++
Sbjct: 94 NALLSDKRRREEYDRF 109
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 35.5 bits (78), Expect = 0.005
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 4 YEILGVSRNASESEIKRSYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQTY 174
Y++L + S +I+ Y K + HPDK NP A D F + A L + K R++
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92
Query: 175 D 177
D
Sbjct: 93 D 93
>SPCC132.03 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 28.3 bits (60), Expect = 0.82
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 14 WVFPEMQVNQK*KEVIIN*QKNSTLIKILQLETNSKKLATLTRCCPILKN 163
W E ++ +K E++ +K T+ K L+++TN L + R PI++N
Sbjct: 119 WSISEKKMKKKLLELLAKNKKRRTMRK-LEIDTNLSFLTDVQRDSPIIEN 167
>SPCC1259.03 |rpa12||DNA-directed RNA polymerase complex I subunit
Rpa12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 119
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 95 ILQLETNSKKLATLTRCCPILKNDRLMINTV 187
I+Q+E+ ++ AT+ CP ND + +T+
Sbjct: 63 IVQVESQKEEAATIEEKCPKCGNDHMTFHTL 93
>SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 422 PPTPLQGPQITFLLNCSLVVLPIYISS-KVTFRGCIVSS 309
PP PL P+I F+ +CS + P +S + TFR ++ +
Sbjct: 269 PPKPL--PRIRFIRSCSSPLAPPVLSKLEATFRAPVLEA 305
>SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF4E
4F complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 257 VIYLAWGVEAEPAGQLVVKTQCTL*KLLWKICIWVKQPN 373
++ A G +P G+ V C + K ++I +W + N
Sbjct: 159 MVLAAIGETLDPTGKEVTGVVCNMRKGFYRIAVWTRNCN 197
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 549 HVTFTNRTALLKLTSHLWCNLLIRNPD 469
H T+T + L L S LW + ++ N D
Sbjct: 480 HPTYTESVSFLWLDSSLWLDWIVENLD 506
>SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit Tfb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 366 CFTHIHIFQSNF*RVHCVFTTSWPAGSASTPHAKYITKEMSKQV 235
CF H + F C+ P ST H K+ + MSK++
Sbjct: 252 CFCHKKVLDIGFVCSVCLSIFCEPRVHCSTCHTKFTVEPMSKKL 295
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 7.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 391 HFYLTVVWLF--YPYTYLPK*LLEGALCLHHEL 299
HFY + ++ + Y + YLP ++ L LHH L
Sbjct: 643 HFYRSTMFFYMTYVFHYLPFFIMGRQLFLHHYL 675
>SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr
1|||Manual
Length = 459
Score = 25.0 bits (52), Expect = 7.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 470 IPCP*QYSQVTADPGFPPTPLQGPQITFLLNCSLVVLPIYISSKV-TFRGCIVS 312
I C + +TA P L G + F + C + + IY+SSKV F CI S
Sbjct: 30 IACNVLWVNMTARNILPKGNL-GFLVEFFIFCLIPLFVIYVSSKVGVFTLCIAS 82
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 25.0 bits (52), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 457 DSIHKSQLIPVFLQLLYKDHK*HFYLTVVWLF 362
DSIH+ L F L +KD + +T +WLF
Sbjct: 82 DSIHREALNSSFKILEFKDIEFDDPVTEIWLF 113
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,226,832
Number of Sequences: 5004
Number of extensions: 43897
Number of successful extensions: 154
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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