Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_M02
(600 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35998 Cluster: 26S protease regulatory subunit 7; n=13... 265 6e-70
UniRef50_Q01FU4 Cluster: 26S proteasome subunit P45 family prote... 189 5e-47
UniRef50_Q6CNB7 Cluster: Similarities with sp|Q9YAC5 Aeropyrum p... 93 1e-31
UniRef50_UPI0000498BF5 Cluster: 26S proteasome subunit P45 famil... 129 4e-29
UniRef50_Q7QYT8 Cluster: GLP_70_13103_11571; n=1; Giardia lambli... 77 4e-13
UniRef50_Q0WQM8 Cluster: F-box protein At1g53790; n=1; Arabidops... 61 2e-08
UniRef50_UPI0000E24A04 Cluster: PREDICTED: similar to mSUG1 prot... 55 1e-06
UniRef50_P62195 Cluster: 26S protease regulatory subunit 8; n=25... 55 1e-06
UniRef50_Q9VA54 Cluster: CG2241-PA; n=2; Eukaryota|Rep: CG2241-P... 53 4e-06
UniRef50_Q9UDI3 Cluster: 26 S protease subunit 7, MSS1=MODULATOR... 46 7e-04
UniRef50_Q7R4L3 Cluster: GLP_49_27747_26542; n=1; Giardia lambli... 46 0.001
UniRef50_Q5R969 Cluster: Putative uncharacterized protein DKFZp4... 45 0.001
UniRef50_Q8TX03 Cluster: Proteasome-activating nucleotidase; n=2... 44 0.004
UniRef50_Q5A299 Cluster: Putative uncharacterized protein; n=5; ... 42 0.008
UniRef50_UPI0000E490DB Cluster: PREDICTED: similar to Psmc6 prot... 40 0.034
UniRef50_A2SSN7 Cluster: 26S proteasome subunit P45 family; n=1;... 39 0.078
UniRef50_Q5C3G8 Cluster: SJCHGC05874 protein; n=2; Bilateria|Rep... 38 0.18
UniRef50_P62333 Cluster: 26S protease regulatory subunit S10B; n... 37 0.42
UniRef50_P17980 Cluster: 26S protease regulatory subunit 6A; n=1... 36 0.73
UniRef50_Q011N6 Cluster: 26S proteasome AAA-ATPase subunit RPT3;... 34 2.9
UniRef50_UPI00006CF327 Cluster: 26S proteasome subunit P45 famil... 33 3.9
UniRef50_A2YEV9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_P62191 Cluster: 26S protease regulatory subunit 4; n=11... 33 3.9
UniRef50_A7D4U9 Cluster: 26S proteasome subunit P45 family; n=1;... 33 5.1
UniRef50_Q53L71 Cluster: POT family, putative; n=3; Oryza sativa... 33 6.8
UniRef50_Q01CL2 Cluster: 26S proteasome subunit 4-like protein; ... 33 6.8
>UniRef50_P35998 Cluster: 26S protease regulatory subunit 7; n=130;
Eukaryota|Rep: 26S protease regulatory subunit 7 - Homo
sapiens (Human)
Length = 433
Score = 265 bits (649), Expect = 6e-70
Identities = 129/177 (72%), Positives = 142/177 (80%)
Frame = +3
Query: 69 MPDHLGGDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKSIKEVEDGIQTVMKRV 248
MPD+LG D R +LDEGDIALLK+YGQ Y++ IK+VED IQ ++K++
Sbjct: 1 MPDYLGADQRKTKEDEKDDKPIR-ALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI 59
Query: 249 NELTGIKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFA 428
NELTGIKESDTG KQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFA
Sbjct: 60 NELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFA 119
Query: 429 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVEEKPDVTYSD 599
KFVVDL+D VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT+MQVEEKPDVTYSD
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD 176
>UniRef50_Q01FU4 Cluster: 26S proteasome subunit P45 family protein;
n=1; Ostreococcus tauri|Rep: 26S proteasome subunit P45
family protein - Ostreococcus tauri
Length = 349
Score = 189 bits (460), Expect = 5e-47
Identities = 90/139 (64%), Positives = 107/139 (76%)
Frame = +3
Query: 144 LDEGDIALLKSYGQGQYTKSIKEVEDGIQTVMKRVNELTGIKESDTGXXXXXXXXXXXXK 323
LDE DIALLK+YG G Y SIK++E+ ++T+ KRVN+L GIKESDTG K
Sbjct: 19 LDEDDIALLKTYGLGAYNDSIKDLENDLKTIAKRVNDLCGIKESDTGLAPPSQWDLTADK 78
Query: 324 QTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDR 503
Q Q +QPLQVARCTKIIN ++D +Y+INVKQ AKFVV L + VAPTDIEEGMRVGVDR
Sbjct: 79 QAFQEQQPLQVARCTKIINPGTDDAQYVINVKQIAKFVVGLGNEVAPTDIEEGMRVGVDR 138
Query: 504 NKYQIHIPLPPKIDPTVTI 560
NKY I +PLPPKIDP+VT+
Sbjct: 139 NKYFIQLPLPPKIDPSVTM 157
>UniRef50_Q6CNB7 Cluster: Similarities with sp|Q9YAC5 Aeropyrum
pernix Putative uncharacterized protein APE2014; n=1;
Kluyveromyces lactis|Rep: Similarities with sp|Q9YAC5
Aeropyrum pernix Putative uncharacterized protein
APE2014 - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 244
Score = 93.5 bits (222), Expect(2) = 1e-31
Identities = 49/73 (67%), Positives = 51/73 (69%)
Frame = -3
Query: 598 SLYVTSGFSSTCIIVTVGSIFGGNGM*IWYLLRSTPTLIPSSISVGATESARSTTNLANC 419
S YVTSGFSST IIVT+GSI GGNG IWYL STPT IPSSISVG T S TTN A C
Sbjct: 66 SEYVTSGFSSTVIIVTLGSILGGNGNSIWYLDLSTPTRIPSSISVGETRSPSPTTNFAIC 125
Query: 418 LTFIMYLGSLESA 380
I YL S S+
Sbjct: 126 FKLITYLASSSSS 138
Score = 66.1 bits (154), Expect(2) = 1e-31
Identities = 35/69 (50%), Positives = 37/69 (53%)
Frame = -3
Query: 385 SALMIFVHLATCKGCSFCNVCLSAARSHKAGGANPVSDSFIPVSSFTLFITVCIPSSTSL 206
SAL+I VHLATC GCS N+CLS SHK GANPVS SF P S F S L
Sbjct: 176 SALIILVHLATCSGCSSLNLCLSPTISHKCDGANPVSLSFTPAFSLIFFSISFKSFSIDL 235
Query: 205 MLFVYWPWP 179
Y P
Sbjct: 236 SFLAYGAAP 244
>UniRef50_UPI0000498BF5 Cluster: 26S proteasome subunit P45 family
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: 26S
proteasome subunit P45 family protein - Entamoeba
histolytica HM-1:IMSS
Length = 394
Score = 129 bits (312), Expect = 4e-29
Identities = 64/148 (43%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 141 SLDEGDIALLKSYGQGQYTKSIKEVEDGIQTVMKRVNELTGIKESDTGXXXXXXXXXXXX 320
+LDE +IA+LK+Y +G Y SIK++E + + ++ L GI+ESDTG
Sbjct: 11 ALDEEEIAILKAYNRGPYANSIKQLEKEVADLATEIHNLVGIQESDTGLAPVSQWDLNAD 70
Query: 321 KQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 500
K+ L EQPL V+RC K + D +P+Y+I++K++AKFVV ++ V +++G RVGVD
Sbjct: 71 KK-LMEEQPLLVSRCIKAM-PDEREPRYVISIKEYAKFVVGKSNRVEKDAVQDGTRVGVD 128
Query: 501 RNKYQIHIPLPPKIDPTVTIM-QVEEKP 581
R +Y+I + LPPKIDP+V++M +V E P
Sbjct: 129 RARYEIKMALPPKIDPSVSVMKEVVELP 156
>UniRef50_Q7QYT8 Cluster: GLP_70_13103_11571; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_70_13103_11571 - Giardia lamblia
ATCC 50803
Length = 510
Score = 76.6 bits (180), Expect = 4e-13
Identities = 31/56 (55%), Positives = 44/56 (78%)
Frame = +3
Query: 432 FVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVEEKPDVTYSD 599
+VV +++AP D+EEGMRV DR+KY I PLPP IDP V++MQV+++P++TY D
Sbjct: 195 YVVSKDENIAPADLEEGMRVACDRSKYAIRFPLPPLIDPLVSLMQVDDRPNLTYRD 250
Score = 42.7 bits (96), Expect = 0.006
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = +3
Query: 141 SLDEGDIALLKSYGQGQYTKSIKEVEDGIQTVMKRVNELTGIKESDTGXXXXXXXXXXXX 320
+LD+ ++ LLK G+G Y+ ++++E I + + +G+++ D G
Sbjct: 27 TLDQSELDLLKQIGKGPYSSELEKLETSITRLANTIKTNSGLEDLDCGLAPPSQWDIEGD 86
Query: 321 KQTLQNEQPLQVARCTKIINADS 389
++N LQ+A T I+ D+
Sbjct: 87 AAIVRNFMALQIATITNILGYDN 109
>UniRef50_Q0WQM8 Cluster: F-box protein At1g53790; n=1; Arabidopsis
thaliana|Rep: F-box protein At1g53790 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 444
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +3
Query: 144 LDEGDIALLKSYGQGQYTKSIKEVEDGIQTVMKRVNELTGIKESDTGXXXXXXXXXXXXK 323
LDE DIAL+K+YG Y+ IK+VE I+ + +++N+L GIKESDTG K
Sbjct: 10 LDEDDIALVKTYGLVPYSAPIKKVEKEIKELTEKINDLCGIKESDTG-------LAPLSK 62
Query: 324 QTLQNEQPLQV--ARCTKIINAD 386
Q +Q QPLQV C + I D
Sbjct: 63 QMMQEGQPLQVGYVSCFRYIPID 85
>UniRef50_UPI0000E24A04 Cluster: PREDICTED: similar to mSUG1 protein
isoform 5; n=1; Pan troglodytes|Rep: PREDICTED: similar
to mSUG1 protein isoform 5 - Pan troglodytes
Length = 369
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +3
Query: 399 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVEEK 578
K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 579 PDVTY 593
PD TY
Sbjct: 144 PDSTY 148
>UniRef50_P62195 Cluster: 26S protease regulatory subunit 8; n=256;
Eukaryota|Rep: 26S protease regulatory subunit 8 - Homo
sapiens (Human)
Length = 406
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +3
Query: 399 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVEEK 578
K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 579 PDVTY 593
PD TY
Sbjct: 144 PDSTY 148
>UniRef50_Q9VA54 Cluster: CG2241-PA; n=2; Eukaryota|Rep: CG2241-PA -
Drosophila melanogaster (Fruit fly)
Length = 399
Score = 53.2 bits (122), Expect = 4e-06
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = +3
Query: 330 LQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNK 509
L EQ +A K + D N K ++ V K+VVD+ ++ D+ RV +
Sbjct: 59 LLQEQGSYIAEVVKPM--DKN--KVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNES 114
Query: 510 YQIHIPLPPKIDPTVTIMQVEEKPDVTY 593
Y +H LP K+DP V++M VE+ PD TY
Sbjct: 115 YTLHKILPNKVDPLVSLMLVEKVPDSTY 142
>UniRef50_Q9UDI3 Cluster: 26 S protease subunit 7, MSS1=MODULATOR of
HIV TAT-mediated transactivation; n=1; Homo sapiens|Rep:
26 S protease subunit 7, MSS1=MODULATOR of HIV
TAT-mediated transactivation - Homo sapiens (Human)
Length = 54
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +3
Query: 486 RVGVDRNKYQIHIPLPPKIDPT 551
RVGVDRNKYQI IPLPPKID T
Sbjct: 23 RVGVDRNKYQIXIPLPPKIDAT 44
>UniRef50_Q7R4L3 Cluster: GLP_49_27747_26542; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_49_27747_26542 - Giardia lamblia
ATCC 50803
Length = 401
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +3
Query: 393 DPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVE 572
D K I K +V+++ V+ +D++ G+RV + + +I + LP +DP +++M+++
Sbjct: 76 DNKCYIKSSVDDKQIVNVSSKVSMSDLKPGLRVALRSSDSEIVMILPKHVDPAISLMKLD 135
Query: 573 EKPDVTYSD 599
+ PD +Y D
Sbjct: 136 KVPDQSYDD 144
>UniRef50_Q5R969 Cluster: Putative uncharacterized protein
DKFZp459F0926; n=1; Pongo pygmaeus|Rep: Putative
uncharacterized protein DKFZp459F0926 - Pongo pygmaeus
(Orangutan)
Length = 197
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +3
Query: 399 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVEEK 578
K ++ V KFV+D+ +++ +D+ V + + Y ++ LP K+D V++M V++
Sbjct: 5 KVLVKVHLKGKFVIDVEKNISISDVTPSSLVVLRNDSYTLYKILPNKVDSLVSLMMVKKV 64
Query: 579 PDVTY 593
PD TY
Sbjct: 65 PDSTY 69
>UniRef50_Q8TX03 Cluster: Proteasome-activating nucleotidase; n=29;
Archaea|Rep: Proteasome-activating nucleotidase -
Methanopyrus kandleri
Length = 436
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +3
Query: 390 NDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQV 569
+D + I+ KFV +++ +V ++E G V +++ + LP + D V M+V
Sbjct: 111 DDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEV 170
Query: 570 EEKPDVTYSD 599
+E PDV+Y D
Sbjct: 171 DESPDVSYDD 180
>UniRef50_Q5A299 Cluster: Putative uncharacterized protein; n=5;
Fungi/Metazoa group|Rep: Putative uncharacterized
protein - Candida albicans (Yeast)
Length = 204
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 598 SLYVTSGFSSTCIIVTVGSIFGGNG 524
S YVTSGFSST I+VT GSI GGNG
Sbjct: 179 SSYVTSGFSSTVIMVTDGSILGGNG 203
>UniRef50_UPI0000E490DB Cluster: PREDICTED: similar to Psmc6
protein; n=4; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Psmc6 protein - Strongylocentrotus
purpuratus
Length = 501
Score = 40.3 bits (90), Expect = 0.034
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 393 DPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVE 572
+ K+I+ ++VV + T +++G RV +D I LP ++DP V M E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRGLDKTKLKQGTRVALDMTTLTIMRYLPREVDPMVYHMSHE 125
Query: 573 EKPDVTYS 596
+ D++YS
Sbjct: 126 DPGDISYS 133
>UniRef50_A2SSN7 Cluster: 26S proteasome subunit P45 family; n=1;
Methanocorpusculum labreanum Z|Rep: 26S proteasome
subunit P45 family - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 422
Score = 39.1 bits (87), Expect = 0.078
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +3
Query: 375 INADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 554
I A ++D + I+ +F+ ++++V P +I G + + + + LP K D +
Sbjct: 90 IEALASDERVIVRSTTGPQFLSKVSETVDPKEIIPGRQCALHPQSFVLIEVLPNKYDTLI 149
Query: 555 TIMQVEEKPDVTYSD 599
+ M+VE P+V+Y+D
Sbjct: 150 SGMEVETAPNVSYAD 164
>UniRef50_Q5C3G8 Cluster: SJCHGC05874 protein; n=2; Bilateria|Rep:
SJCHGC05874 protein - Schistosoma japonicum (Blood
fluke)
Length = 228
Score = 37.9 bits (84), Expect = 0.18
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +3
Query: 528 LPPKIDPTVTIMQVEEKPDVTYSD 599
LPP+ D ++T++Q +EKPDV+Y+D
Sbjct: 140 LPPEADSSITMLQADEKPDVSYAD 163
>UniRef50_P62333 Cluster: 26S protease regulatory subunit S10B;
n=129; Eukaryota|Rep: 26S protease regulatory subunit
S10B - Homo sapiens (Human)
Length = 389
Score = 36.7 bits (81), Expect = 0.42
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 393 DPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVE 572
+ K+I+ ++VV + + ++ G RV +D I LP ++DP V M E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 125
Query: 573 EKPDVTYSD 599
+ +V+YS+
Sbjct: 126 DPGNVSYSE 134
>UniRef50_P17980 Cluster: 26S protease regulatory subunit 6A; n=154;
Eukaryota|Rep: 26S protease regulatory subunit 6A - Homo
sapiens (Human)
Length = 439
Score = 35.9 bits (79), Expect = 0.73
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 471 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVEEKPDVTYSD 599
++ G VGV+++ Y I LP + D V M+V+E+P YSD
Sbjct: 145 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSD 187
>UniRef50_Q011N6 Cluster: 26S proteasome AAA-ATPase subunit RPT3;
n=1; Ostreococcus tauri|Rep: 26S proteasome AAA-ATPase
subunit RPT3 - Ostreococcus tauri
Length = 370
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/85 (21%), Positives = 45/85 (52%)
Frame = +3
Query: 345 PLQVARCTKIINADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHI 524
PL + + ++++A++ I++ + + V + ++ ++ V + R+ +
Sbjct: 67 PLVIGQFLEMVDAETG----IVSSTTGSNYYVRILSTLNRELLKPSSSVALHRHSNALVE 122
Query: 525 PLPPKIDPTVTIMQVEEKPDVTYSD 599
LPP+ D +++++ E+PDV YSD
Sbjct: 123 ILPPEADSSISLLSDAERPDVKYSD 147
>UniRef50_UPI00006CF327 Cluster: 26S proteasome subunit P45 family
protein; n=1; Tetrahymena thermophila SB210|Rep: 26S
proteasome subunit P45 family protein - Tetrahymena
thermophila SB210
Length = 441
Score = 33.5 bits (73), Expect = 3.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 489 VGVDRNKYQIHIPLPPKIDPTVTIMQVEEKPDVTYSD 599
+ + R+ + + LP + D ++ +M+V EKPDV+Y D
Sbjct: 113 IALHRHSHSVVDILPSESDSSIQMMKVTEKPDVSYQD 149
>UniRef50_A2YEV9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 423
Score = 33.5 bits (73), Expect = 3.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 399 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTIMQVEEK 578
++I+ ++VV V + G RV +D I LP ++DP V M E+
Sbjct: 76 RFIVKASSGPRYVVGCRSKVDKEKLIAGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDP 135
Query: 579 PDVTYS 596
+V+YS
Sbjct: 136 GNVSYS 141
>UniRef50_P62191 Cluster: 26S protease regulatory subunit 4; n=119;
Eukaryota|Rep: 26S protease regulatory subunit 4 - Homo
sapiens (Human)
Length = 440
Score = 33.5 bits (73), Expect = 3.9
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = +3
Query: 345 PLQVARCTKIINADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHI 524
P+ V +II+ D I++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEIID----DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 525 PLPPKIDPTVTIMQVEEKPDVTYSD 599
L DP VT+M+VE+ P TY+D
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYAD 186
>UniRef50_A7D4U9 Cluster: 26S proteasome subunit P45 family; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: 26S proteasome
subunit P45 family - Halorubrum lacusprofundi ATCC 49239
Length = 426
Score = 33.1 bits (72), Expect = 5.1
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = +3
Query: 339 EQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQI 518
+ PL VA +I + ++ N + + ++ + + P D RV V+ N +
Sbjct: 91 QSPLFVATVQEITPDGAVIKQHGNNQEALTEITAEMREKLNPDD-----RVAVN-NSLSV 144
Query: 519 HIPLPPKIDPTVTIMQVEEKPDVTYSD 599
L + D +MQVE PDVTY+D
Sbjct: 145 VKKLEKETDVRARVMQVEHSPDVTYAD 171
>UniRef50_Q53L71 Cluster: POT family, putative; n=3; Oryza
sativa|Rep: POT family, putative - Oryza sativa subsp.
japonica (Rice)
Length = 652
Score = 32.7 bits (71), Expect = 6.8
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = -3
Query: 451 SARSTTNLANCLTFIMYLGSLESALMIFVHLATCKGCSFCNVCLSAARSHKAGGANPVSD 272
SA T NL LT +LG+ SA++IFV+ A C +S A +
Sbjct: 111 SASVTANLIIYLTTKYHLGAASSAIIIFVYQAAANFLPVCGAIVSDALLGRYLMVTLTLF 170
Query: 271 SFIPVSSFTLFITVCIPSST 212
S +F LF+T IP T
Sbjct: 171 S-CTTGTFMLFLTSLIPKLT 189
>UniRef50_Q01CL2 Cluster: 26S proteasome subunit 4-like protein;
n=2; Eukaryota|Rep: 26S proteasome subunit 4-like
protein - Ostreococcus tauri
Length = 422
Score = 32.7 bits (71), Expect = 6.8
Identities = 21/85 (24%), Positives = 42/85 (49%)
Frame = +3
Query: 345 PLQVARCTKIINADSNDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHI 524
P+ V +II+ D I++ ++ V++A V + +E G V + +
Sbjct: 112 PMSVGSLEEIID----DTHGIVSSSIGPEYYVNIASFVDKSQLEPGCAVLLHHKNSAVVG 167
Query: 525 PLPPKIDPTVTIMQVEEKPDVTYSD 599
L +DP V++M+V++ P +Y+D
Sbjct: 168 TLADDVDPMVSVMKVDKAPLESYAD 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,914,266
Number of Sequences: 1657284
Number of extensions: 10885836
Number of successful extensions: 29942
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29924
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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