BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_L22
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence si... 34 0.54
BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence si... 34 0.54
BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence si... 34 0.54
BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence si... 34 0.54
AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein. 34 0.54
AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens ... 34 0.54
BC040518-1|AAH40518.1| 904|Homo sapiens MAP7D3 protein protein. 31 3.8
EF415484-1|ABO27065.1| 108|Homo sapiens T cell receptor beta ch... 31 5.0
AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein. 30 6.6
BC109088-1|AAI09089.1| 248|Homo sapiens ZNF509 protein protein. 30 8.8
BC109087-1|AAI09088.1| 765|Homo sapiens zinc finger protein 509... 30 8.8
BC089401-1|AAH89401.1| 379|Homo sapiens ZNF509 protein protein. 30 8.8
BC016477-1|AAH16477.1| 248|Homo sapiens ZNF509 protein protein. 30 8.8
AK127560-1|BAC87035.1| 765|Homo sapiens protein ( Homo sapiens ... 30 8.8
AB209466-1|BAD92703.1| 262|Homo sapiens zinc finger protein 509... 30 8.8
>BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 143 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 307
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 143 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 307
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 143 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 307
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 143 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 307
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein.
Length = 605
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 143 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 307
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ32981 fis, clone TESTI3000002, weakly similar to
L.mexicana lmsap2 gene for secreted acid phosphatase 2
(SAP2). ).
Length = 605
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 143 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 307
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC040518-1|AAH40518.1| 904|Homo sapiens MAP7D3 protein protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 33 SYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTP 149
SY+ C + WS+S A C L S ++T N +I ++ P+P
Sbjct: 518 SYTEC-YKWSSSPANACGLPSPIST--NRQIQKNCPPSP 553
>EF415484-1|ABO27065.1| 108|Homo sapiens T cell receptor beta chain
protein.
Length = 108
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 6 QANTQRCSPSYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRV-LSLS 182
Q T RC P ++ FFW T L+ L+ +NN+ I S P ++ K S S
Sbjct: 10 QEVTLRCKPIQATTPFFWYRQTM-MRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFS 68
Query: 183 TL 188
TL
Sbjct: 69 TL 70
>AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.
Length = 1583
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 30 PSYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRVL 173
PS+ F + T + KSL+ TS + + R P PG+ G L
Sbjct: 28 PSFPGGSMFRRTKSCRTSNRKSLILTSTSPTLPRPHSPLPGHLGSSPL 75
>BC109088-1|AAI09089.1| 248|Homo sapiens ZNF509 protein protein.
Length = 248
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 62 GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 235
GV+ + L +PG + + QP+ +A S V AG + +DG AM++ + +
Sbjct: 146 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 203
Query: 236 NHRLSALGS 262
NH LGS
Sbjct: 204 NHGGDPLGS 212
>BC109087-1|AAI09088.1| 765|Homo sapiens zinc finger protein 509
protein.
Length = 765
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 62 GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 235
GV+ + L +PG + + QP+ +A S V AG + +DG AM++ + +
Sbjct: 663 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 720
Query: 236 NHRLSALGS 262
NH LGS
Sbjct: 721 NHGGDPLGS 729
>BC089401-1|AAH89401.1| 379|Homo sapiens ZNF509 protein protein.
Length = 379
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 62 GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 235
GV+ + L +PG + + QP+ +A S V AG + +DG AM++ + +
Sbjct: 277 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 334
Query: 236 NHRLSALGS 262
NH LGS
Sbjct: 335 NHGGDPLGS 343
>BC016477-1|AAH16477.1| 248|Homo sapiens ZNF509 protein protein.
Length = 248
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 62 GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 235
GV+ + L +PG + + QP+ +A S V AG + +DG AM++ + +
Sbjct: 146 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 203
Query: 236 NHRLSALGS 262
NH LGS
Sbjct: 204 NHGGDPLGS 212
>AK127560-1|BAC87035.1| 765|Homo sapiens protein ( Homo sapiens
cDNA FLJ45653 fis, clone CTONG2011801, moderately
similar to Zinc finger protein 91. ).
Length = 765
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 62 GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 235
GV+ + L +PG + + QP+ +A S V AG + +DG AM++ + +
Sbjct: 663 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 720
Query: 236 NHRLSALGS 262
NH LGS
Sbjct: 721 NHGGDPLGS 729
>AB209466-1|BAD92703.1| 262|Homo sapiens zinc finger protein 509
variant protein.
Length = 262
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 62 GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 235
GV+ + L +PG + + QP+ +A S V AG + +DG AM++ + +
Sbjct: 160 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 217
Query: 236 NHRLSALGS 262
NH LGS
Sbjct: 218 NHGGDPLGS 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,137,641
Number of Sequences: 237096
Number of extensions: 2295227
Number of successful extensions: 4821
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4821
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -