Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L20
         (426 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC119643-1|AAI19644.1|  370|Homo sapiens keratin associated prot...    29   6.6  
AB076364-1|BAD01551.1|  245|Homo sapiens keratin associated prot...    29   6.6  
AB076354-1|BAD01541.1|  370|Homo sapiens keratin associated prot...    29   6.6  
AK128833-1|BAC87633.1|  286|Homo sapiens protein ( Homo sapiens ...    29   8.7  

>BC119643-1|AAI19644.1|  370|Homo sapiens keratin associated protein
           10-7 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 112 VSSPACRRTMELVHC-SGCSSYCS 44
           VSSP CR T E   C SGC+S C+
Sbjct: 63  VSSPCCRVTCEPSPCQSGCTSSCT 86


>AB076364-1|BAD01551.1|  245|Homo sapiens keratin associated protein
           protein.
          Length = 245

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 112 VSSPACRRTMELVHC-SGCSSYCS 44
           VSSP CR T E   C SGC+S C+
Sbjct: 58  VSSPCCRVTCEPSPCQSGCTSSCT 81


>AB076354-1|BAD01541.1|  370|Homo sapiens keratin associated protein
           protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 112 VSSPACRRTMELVHC-SGCSSYCS 44
           VSSP CR T E   C SGC+S C+
Sbjct: 63  VSSPCCRVTCEPSPCQSGCTSSCT 86


>AK128833-1|BAC87633.1|  286|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46328 fis, clone TESTI4044291. ).
          Length = 286

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -1

Query: 102 PLAGAPWNWSTAPAVPR--TVRCSYSGSL 22
           P+ G PW W  +PAV R     C+ S SL
Sbjct: 22  PVPGRPWPWRASPAVQRQPLSSCTASASL 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,876,132
Number of Sequences: 237096
Number of extensions: 1526012
Number of successful extensions: 6909
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6909
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)