Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L20
         (426 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   3.2  
U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical pr...    28   3.2  
U21318-1|AAC46669.1|  457|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    26   9.8  
U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical p...    26   9.8  

>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 189  LGSVDLTNQIKLGAATAGLVYDNVNRHGATLTNTHIPGIGD 311
            +G VDL+    LG A    + DNV+ HG  L +   P +GD
Sbjct: 1832 IGKVDLSQNSSLGMAK---LLDNVSVHGILLDSIMDPTVGD 1869


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 111  TINSDGTSGAMVNVPITGNENHKLSALGSVDLTNQIKLGAATAGLVYDNVNRHGATLTNT 290
            T+ + G++G+ V  P T +     S+  S+  +     G++T+G          +T TN+
Sbjct: 1548 TVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTSGPTVATTQGSSSTQTNS 1607

Query: 291  H 293
            +
Sbjct: 1608 N 1608


>U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical
           protein F38B6.6 protein.
          Length = 690

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +3

Query: 159 TGNENHKLSALGSVDLTNQIKLGAATAGLVYDNVNRHGATLTNTHIPGIGDKLSVAGKVN 338
           T  ENH  SA   +DL     L  A  G++Y  ++RH    +   I    D  ++  K N
Sbjct: 619 TAAENHIKSA---IDLNPTSVLFHANLGILYQRMSRHKEAESQYRIVLALDSKNIVAKQN 675

Query: 339 LFHNNDH 359
           L    +H
Sbjct: 676 LQKLEEH 682


>U21318-1|AAC46669.1|  457|Caenorhabditis elegans Hypothetical
           protein K03H9.3 protein.
          Length = 457

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 329 TSNRQFISNSRNMSVCEGSSVAVD 258
           T+N  FIS ++N+S+C    +A D
Sbjct: 165 TANATFISIAKNLSICSTECIAKD 188


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 145 TIAPEVPSELIVSSPACRRTMELVHCSGCSSY 50
           ++AP +PS  +     C    +  H +GCSS+
Sbjct: 870 SVAPYIPSVTVNPVDTCTSLSDGTHGTGCSSF 901


>U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical
           protein B0207.1 protein.
          Length = 564

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 367 PRRRSRPEICPPFPIYHPP 423
           P +R+ P+ CPP P+ HPP
Sbjct: 115 PVQRTPPQ-CPPPPVPHPP 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,590,441
Number of Sequences: 27780
Number of extensions: 213674
Number of successful extensions: 573
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)