Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L19
         (461 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M14221-1|AAA52129.1|  339|Homo sapiens CTSB protein.                   51   2e-06
L16510-1|AAC37547.1|  339|Homo sapiens cathepsin B protein.            51   2e-06
BC095408-1|AAH95408.1|  339|Homo sapiens cathepsin B protein.          51   2e-06
BC010240-1|AAH10240.1|  339|Homo sapiens cathepsin B protein.          51   2e-06
AF417846-1|AAM46639.1|  143|Homo sapiens immunoglobulin heavy ch...    31   1.9  
AB209134-1|BAD92371.1|  276|Homo sapiens COP9 signalosome subuni...    29   5.9  

>M14221-1|AAA52129.1|  339|Homo sapiens CTSB protein.
          Length = 339

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +2

Query: 383 LPENFDPRDKWPECPTLNEIRDQGSC 460
           LP +FD R++WP+CPT+ EIRDQGSC
Sbjct: 80  LPASFDAREQWPQCPTIKEIRDQGSC 105



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 210 SDAFINLINKKQNTWKAGRN 269
           SD  +N +NK+  TW+AG N
Sbjct: 27  SDELVNYVNKRNTTWQAGHN 46


>L16510-1|AAC37547.1|  339|Homo sapiens cathepsin B protein.
          Length = 339

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +2

Query: 383 LPENFDPRDKWPECPTLNEIRDQGSC 460
           LP +FD R++WP+CPT+ EIRDQGSC
Sbjct: 80  LPASFDAREQWPQCPTIKEIRDQGSC 105



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 210 SDAFINLINKKQNTWKAGRN 269
           SD  +N +NK+  TW+AG N
Sbjct: 27  SDELVNYVNKRNTTWQAGHN 46


>BC095408-1|AAH95408.1|  339|Homo sapiens cathepsin B protein.
          Length = 339

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +2

Query: 383 LPENFDPRDKWPECPTLNEIRDQGSC 460
           LP +FD R++WP+CPT+ EIRDQGSC
Sbjct: 80  LPASFDAREQWPQCPTIKEIRDQGSC 105



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 210 SDAFINLINKKQNTWKAGRN 269
           SD  +N +NK+  TW+AG N
Sbjct: 27  SDELVNYVNKRNTTWQAGHN 46


>BC010240-1|AAH10240.1|  339|Homo sapiens cathepsin B protein.
          Length = 339

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +2

Query: 383 LPENFDPRDKWPECPTLNEIRDQGSC 460
           LP +FD R++WP+CPT+ EIRDQGSC
Sbjct: 80  LPASFDAREQWPQCPTIKEIRDQGSC 105



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 210 SDAFINLINKKQNTWKAGRN 269
           SD  +N +NK+  TW+AG N
Sbjct: 27  SDELVNYVNKRNTTWQAGHN 46


>AF417846-1|AAM46639.1|  143|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 143

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -3

Query: 420 SGHLSLGSKFSGRFAISSAS*VTLGNFNILSSFNAPINILMCANGCMRR 274
           SG  SL SKF GR A++S + VT     + S  +    +  CA G + R
Sbjct: 74  SGGTSLLSKFQGRVAMTSDTSVTTAYMELTSLTSDDTAVYFCARGDVNR 122


>AB209134-1|BAD92371.1|  276|Homo sapiens COP9 signalosome subunit 5
           variant protein.
          Length = 276

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 352 FRQLQYIIVFQCSH*YFDVCK 290
           +++  YI++  CSH YF  CK
Sbjct: 5   YKEFNYIVILFCSHHYFKYCK 25


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,909,542
Number of Sequences: 237096
Number of extensions: 1116469
Number of successful extensions: 2401
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2401
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)