Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L14
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   0.49 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.0  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   4.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.0  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 377 GQGSFLNIELISEKCEAYWCQSVTELKKDFPNKVI 481
           G G  L I+ ++  C A+W   V+ +   F NK+I
Sbjct: 378 GGGYLLGIQCLTVVCLAFWSFIVSTILLWFINKII 412


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 638 KPDLVHRLGPFQIPPCRAGTTDLVLKHPHQLLPLSWTVVSNPPH 507
           +P+L +R G           T LV +   +LL L W V+ +PP+
Sbjct: 231 RPELTNRKGVVFHHDNARPHTSLVTRQ--KLLELGWDVLPHPPY 272


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 70  IRCLVHALLFTRHLIRLAYRTTKI 141
           +  L+H L  T  L  LAY+ TKI
Sbjct: 126 VALLLHMLTTTITLTLLAYQATKI 149


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 310 GYGYQRVTSYSSWCDIRRKLRTWTR 384
           GY YQ V  + +  DIR +   W R
Sbjct: 415 GYQYQVVGKWFNSLDIRTEELIWAR 439


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 310 GYGYQRVTSYSSWCDIRRKLRTWTR 384
           GY YQ V  + +  DIR +   W R
Sbjct: 505 GYQYQVVGKWFNSLDIRTEELIWAR 529


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,634
Number of Sequences: 438
Number of extensions: 4738
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)