Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L09
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeo...    31   0.77 
AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protei...    31   0.77 
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    30   1.0  
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    30   1.0  
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    30   1.0  
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase...    29   1.8  
AF016437-1|AAB65884.2|  690|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z69794-1|CAA93679.2|  663|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    27   7.2  
Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    27   9.5  
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    27   9.5  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    27   9.5  
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase...    27   9.5  
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de...    27   9.5  
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de...    27   9.5  

>U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeobox
           protein 21 protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
 Frame = -1

Query: 545 PQKLQIPTDILDYLRTNKQSNQPELQDRADVQVMEAFVEPNTPYRVEIGTNNRSEGDGRA 366
           PQ++ +P +  +Y   + Q     L+D      ME  V      ++E  ++  S+GDG  
Sbjct: 63  PQQV-VPPE-RNYAELDAQLESVVLEDHTAESTMEPGVSATVTEQLEEKSDKSSDGDG-T 119

Query: 365 SEVVIPSQRNVDLEAQVDPDELKLLGATEQCGPEGERDPVTLVCR--LRSQPAPNSEDSS 192
           S+ +  S ++V+ E + D +E       E   P+  R   T + R  L SQ    +  +S
Sbjct: 120 SKRLTRSLKSVENETEEDHEE------KEDEAPQSSRRESTRLKRKLLESQKTVQTTGNS 173

Query: 191 AEKNVKIESQPTP 153
           +  + K + +  P
Sbjct: 174 SRASSKSQEKEVP 186


>AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protein
           protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
 Frame = -1

Query: 545 PQKLQIPTDILDYLRTNKQSNQPELQDRADVQVMEAFVEPNTPYRVEIGTNNRSEGDGRA 366
           PQ++ +P +  +Y   + Q     L+D      ME  V      ++E  ++  S+GDG  
Sbjct: 63  PQQV-VPPE-RNYAELDAQLESVVLEDHTAESTMEPGVSATVTEQLEEKSDKSSDGDG-T 119

Query: 365 SEVVIPSQRNVDLEAQVDPDELKLLGATEQCGPEGERDPVTLVCR--LRSQPAPNSEDSS 192
           S+ +  S ++V+ E + D +E       E   P+  R   T + R  L SQ    +  +S
Sbjct: 120 SKRLTRSLKSVENETEEDHEE------KEDEAPQSSRRESTRLKRKLLESQKTVQTTGNS 173

Query: 191 AEKNVKIESQPTP 153
           +  + K + +  P
Sbjct: 174 SRASSKSQEKEVP 186


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 479  PELQDRADVQVMEAFVEPNTPYRVEI-GTNNRSEG 378
            P+  D  +V + +    PNTPY++ I  TN+ SEG
Sbjct: 1089 PDGADHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1123


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
            protein K07E12.1a protein.
          Length = 13100

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 479  PELQDRADVQVMEAFVEPNTPYRVEI-GTNNRSEG 378
            P+  D  +V + +    PNTPY++ I  TN+ SEG
Sbjct: 1152 PDGADHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1186


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
            protein.
          Length = 13100

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 479  PELQDRADVQVMEAFVEPNTPYRVEI-GTNNRSEG 378
            P+  D  +V + +    PNTPY++ I  TN+ SEG
Sbjct: 1152 PDGADHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1186


>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
           beta protein.
          Length = 1418

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +1

Query: 202 SELGAGCDRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDAR 372
           S L AG D+  H  V     S SP+ P  S  P    SSGST  S  T    G +TS + 
Sbjct: 633 SPLAAG-DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSG 689

Query: 373 PS 378
           PS
Sbjct: 690 PS 691


>AF016437-1|AAB65884.2|  690|Caenorhabditis elegans Hypothetical
           protein F13H6.1 protein.
          Length = 690

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +1

Query: 250 GSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPSPSERLFVPISTLYGVLG 429
           G  +PS   C V P NF+ S     + +  +  G +TS     P+  + V   T    LG
Sbjct: 133 GKLTPSDD-CEVTPRNFDRSRRRTFNPAALIRCGRSTSANALLPNYNMDVTTDT--NDLG 189

Query: 430 STNASITC 453
           S++ S+TC
Sbjct: 190 SSSKSLTC 197


>Z69794-1|CAA93679.2|  663|Caenorhabditis elegans Hypothetical
           protein R03G8.1 protein.
          Length = 663

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 569 NVVVLIAVPQKLQIPTDILDYLRTNKQSNQPELQDRADV 453
           N +  I+VP  L+  TDIL  L  N +  Q     RA +
Sbjct: 438 NPLTAISVPNSLRTNTDILKILNMNSEKLQTHFDTRATI 476


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 463  EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLILKLRSTRMN 302
            +P   LW+ +  +I  I LRSV +      +  R++  QA + L+ ++R T  N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 463  EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLILKLRSTRMN 302
            +P   LW+ +  +I  I LRSV +      +  R++  QA + L+ ++R T  N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 463  EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLILKLRSTRMN 302
            +P   LW+ +  +I  I LRSV +      +  R++  QA + L+ ++R T  N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554


>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 230 LRSQPAPNSEDSSAEKNVKIESQPTPEVIPS 138
           L S  AP + D +   N  +   P+P V+PS
Sbjct: 256 LASSDAPATPDQNKSDNSSLRQTPSPSVLPS 286


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 275  CGPEGERDPVTLVCRLRSQPAPNSEDSSAEKNVKIESQPTPEVI 144
            CGP G    +TL+  LRSQ            NV   S  TPE++
Sbjct: 2536 CGPPGSGKTMTLLAALRSQ------QEMEVVNVNFSSSTTPELL 2573


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 221 QPAPN-SEDSSAEKNVKIESQPTPEVIP 141
           QPAP  +E    E  V +E  P P+VIP
Sbjct: 380 QPAPEVTEPQVVEPQVVVEPAPQPQVIP 407


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 221 QPAPN-SEDSSAEKNVKIESQPTPEVIP 141
           QPAP  +E    E  V +E  P P+VIP
Sbjct: 380 QPAPEVTEPQVVEPQVVVEPAPQPQVIP 407


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 275  CGPEGERDPVTLVCRLRSQPAPNSEDSSAEKNVKIESQPTPEVI 144
            CGP G    +TL+  LRSQ            NV   S  TPE++
Sbjct: 2536 CGPPGSGKTMTLLAALRSQ------QEMEVVNVNFSSSTTPELL 2573


>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
           beta homolog EGL-8 protein.
          Length = 1431

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +1

Query: 223 DRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPS 378
           D+  H  V     S SP+ P  S  P    SSGST  S  T    G +TS + PS
Sbjct: 640 DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSGPS 692


>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
           defective protein 8,isoform a protein.
          Length = 1419

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +1

Query: 223 DRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPS 378
           D+  H  V     S SP+ P  S  P    SSGST  S  T    G +TS + PS
Sbjct: 640 DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSGPS 692


>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
           defective protein 8,isoform b protein.
          Length = 1431

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +1

Query: 223 DRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPS 378
           D+  H  V     S SP+ P  S  P    SSGST  S  T    G +TS + PS
Sbjct: 640 DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSGPS 692


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,181,761
Number of Sequences: 27780
Number of extensions: 268119
Number of successful extensions: 976
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)