Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L09
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.7  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 415 IELRSVRIIVLKV-TAVRRRLSSQAKETLILKLRSTR 308
           I L  + ++ L++  A RRRL  +A+++ I  ++STR
Sbjct: 207 IPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTR 243


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 415 IELRSVRIIVLKV-TAVRRRLSSQAKETLILKLRSTR 308
           I L  + ++ L++  A RRRL  +A+++ I  ++STR
Sbjct: 207 IPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTR 243


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 415 IELRSVRIIVLKV-TAVRRRLSSQAKETLILKLRSTR 308
           I L  + ++ L++  A RRRL  +A+++ I  ++STR
Sbjct: 207 IPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTR 243


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 202  SELGAGCDRSLHTRVTGSRSPSGPHCSV 285
            +E+GA       T +T   +PSGP  S+
Sbjct: 956  NEIGASDPSDTVTIITAEEAPSGPPTSI 983


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 217 GCDRSLHTRVTGSRSPSGPHCSVAPSNFN 303
           G D  L    TG++  SG H SV+    N
Sbjct: 287 GSDAELICVTTGTKCVSGEHLSVSGGALN 315


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 435 KRLHNLYIGSVL*LGLVALFV 497
           KR HN+++ ++L     +LFV
Sbjct: 272 KRKHNVFVNNILAASACSLFV 292


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -2

Query: 421 LHIELRSVRIIVLKVTAVRRRLSSQAKETLILKLRST-RMN*NYLVRLSSVVL 266
           L + + S   I+  V A  + +  QAK+  +  LRS+   N +   +L+ V L
Sbjct: 229 LFLIIYSYWFIIQAVAAHEKNMREQAKKMNVASLRSSENQNTSAECKLAKVAL 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,367
Number of Sequences: 438
Number of extensions: 3613
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)