Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L08
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          60   8e-11
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          42   2e-05
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.4  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 59.7 bits (138), Expect = 8e-11
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 149 LSTNFIFECGIKLGLQPATVATAAIFYHKFFKEADKNDYDCYVICTACLCAAGKPRDEPV 328
           L    I   GI L L    +AT  + + +FF       +       +C+C A K  + P 
Sbjct: 80  LGCELIQTAGILLKLPQVAMATGQVLFQRFFYSKSFVRHSMEATAMSCICLASKIEEAPR 139

Query: 329 RLRDAVNVAYN----SINRGAGPLELGEEYWLWRGAVAQAELLVLRLLGFNLDTPSSHRC 496
           R+RD +NV ++       +   P+ L + Y   +  V +AE  VL+ LGF +     H+ 
Sbjct: 140 RIRDVINVFHHIKQVRSQKPLLPMILDQHYINLKSQVIKAERRVLKELGFCVHVKHPHKL 199

Query: 497 LLHYLRSLQEWFPAIQWRTAPIARTAMAFLQDFHHSAAILDYRAPHVAVACL 652
           ++ YL+ L+        +   + + A  F+ D   +   + Y+   +A AC+
Sbjct: 200 IVMYLKYLE------LEKHQNMMQMAWNFMNDSFRTDVFVRYQPETIACACI 245


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 41.5 bits (93), Expect = 2e-05
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +2

Query: 149 LSTNFIFECGIKLGLQPATVATAAIFYHKFFKEADKNDYDCYVICTACLCAAGKPRDEPV 328
           L    I   GI L L    +AT  + + +FF       +       +C+C A K  + P 
Sbjct: 80  LGCELIQTAGILLKLPQVAMATGQVLFQRFFYSKSFVRHSMEATAMSCICLASKIEEAPR 139

Query: 329 RLRDAVNVAYN 361
           R+RD +NV ++
Sbjct: 140 RIRDVINVFHH 150


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 462 PSSLKTNSSA*ATAPLHNQYSSPNSKGP 379
           PSS  +N S  A +PL+ + S P  + P
Sbjct: 791 PSSASSNQSRVAISPLYCEGSVPTLQSP 818


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,988
Number of Sequences: 2352
Number of extensions: 15270
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)