Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_L06
         (538 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   1.5  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   1.5  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   3.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.0  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 61  YILFIVNFAKVNADCGIVSKDDWDG 135
           ++LF +  A V+A C  V K  +DG
Sbjct: 4   FVLFAILIAIVHASCASVPKVVYDG 28


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 TIPQSALTFAKFTINKI*TKQRSIFILQTHILR-LYGT 3
           T+ + A T  + T NK+  + +++FIL   I+R + GT
Sbjct: 181 TMNKIAETLDEDTKNKLIEESKTVFILNNEIIRSIQGT 218


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 64  YKQNKEAYSSYKLIYY 17
           Y  N   Y++YK +YY
Sbjct: 104 YNYNNNNYNNYKKLYY 119


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 349 HVSVPTHAYNRKALRITVIGNYNSHQPTAEQIDALK 456
           H+++      + A+RI +   Y+SH    E  + LK
Sbjct: 503 HITINADKPMKAAIRIFIGPKYDSHHKLIEIPEDLK 538


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 349 HVSVPTHAYNRKALRITVIGNYNSHQPTAEQIDALK 456
           H+++      + A+RI +   Y+SH    E  + LK
Sbjct: 503 HITINADKPMKAAIRIFIGPKYDSHHKLIEIPEDLK 538


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 111 NTAVRVNLCKVYDKQDINKTKKH 43
           NTA  ++ C++     +NK   H
Sbjct: 565 NTAATLSFCEMIHNAQVNKRSIH 587


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,195
Number of Sequences: 438
Number of extensions: 3932
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)