Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_K24
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 343 4e-94
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 343 4e-94
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 343 4e-94
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 343 4e-94
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 343 4e-94
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 343 4e-94
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 343 4e-94
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 341 2e-93
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 334 1e-91
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 334 1e-91
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 334 1e-91
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 334 1e-91
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 334 1e-91
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 334 1e-91
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 321 1e-87
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 314 2e-85
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 311 1e-84
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 105 2e-22
BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein. 34 0.43
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 33 0.57
BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S. cerevis... 33 0.99
BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein. 33 0.99
BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein. 33 0.99
AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processi... 33 0.99
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 33 0.99
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 1.7
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 1.7
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 1.7
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 1.7
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.7
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.7
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 1.7
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 4.0
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 4.0
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.0
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 4.0
U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosyl... 30 5.3
AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA glycos... 30 5.3
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 7.0
X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for ... 29 9.2
X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for ... 29 9.2
X14085-1|CAA32247.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 9.2
X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein. 29 9.2
U10474-1|AAA68220.1| 340|Homo sapiens beta-1,4-galactosyltransf... 29 9.2
U10473-1|AAA68219.1| 308|Homo sapiens beta-1,4-galactosyltransf... 29 9.2
M70432-1|AAB00776.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 9.2
M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta 1,4-... 29 9.2
M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta 1,4-... 29 9.2
M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human galactosy... 29 9.2
D29805-1|BAA06188.1| 398|Homo sapiens beta-1,4-galactosyltransf... 29 9.2
BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein. 29 9.2
AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta... 29 9.2
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 29 9.2
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 29 9.2
AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein. 29 9.2
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 343 bits (842), Expect = 4e-94
Identities = 152/196 (77%), Positives = 173/196 (88%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 343 bits (842), Expect = 4e-94
Identities = 152/196 (77%), Positives = 173/196 (88%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 343 bits (842), Expect = 4e-94
Identities = 152/196 (77%), Positives = 173/196 (88%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 343 bits (842), Expect = 4e-94
Identities = 152/196 (77%), Positives = 173/196 (88%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 343 bits (842), Expect = 4e-94
Identities = 152/196 (77%), Positives = 173/196 (88%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 343 bits (842), Expect = 4e-94
Identities = 152/196 (77%), Positives = 173/196 (88%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 343 bits (842), Expect = 4e-94
Identities = 152/196 (77%), Positives = 173/196 (88%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 341 bits (837), Expect = 2e-93
Identities = 151/196 (77%), Positives = 172/196 (87%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+T
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGR+G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 334 bits (821), Expect = 1e-91
Identities = 148/196 (75%), Positives = 171/196 (87%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGRVG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 334 bits (821), Expect = 1e-91
Identities = 148/196 (75%), Positives = 171/196 (87%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 4 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKI 63
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 64 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 123
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+
Sbjct: 124 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 183
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGRVG I +RER
Sbjct: 184 GGANLGRVGVITNRER 199
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 334 bits (821), Expect = 1e-91
Identities = 148/196 (75%), Positives = 171/196 (87%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGRVG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 334 bits (821), Expect = 1e-91
Identities = 148/196 (75%), Positives = 171/196 (87%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGRVG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 334 bits (821), Expect = 1e-91
Identities = 148/196 (75%), Positives = 171/196 (87%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGRVG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 334 bits (821), Expect = 1e-91
Identities = 148/196 (75%), Positives = 171/196 (87%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 542 GGRNLGRVGTIVSRER 589
GG NLGRVG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 321 bits (788), Expect = 1e-87
Identities = 142/196 (72%), Positives = 166/196 (84%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 181
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKI 64
Query: 182 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 361
Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLC
Sbjct: 65 CMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLC 124
Query: 362 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 541
KVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI FIKFD+GN+CM+
Sbjct: 125 KVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVI 184
Query: 542 GGRNLGRVGTIVSRER 589
G NLGRVG I +RER
Sbjct: 185 AGANLGRVGVITNRER 200
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 139/180 (77%), Positives = 159/180 (88%)
Frame = +2
Query: 50 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 229
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 230 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLV 409
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 410 THDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRER 589
THD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +RER
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 311 bits (763), Expect = 1e-84
Identities = 140/182 (76%), Positives = 160/182 (87%)
Frame = +2
Query: 44 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 223
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 224 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPY 403
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 404 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSR 583
LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 584 ER 589
ER
Sbjct: 180 ER 181
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 105 bits (251), Expect = 2e-22
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 2 PKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 157
PKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 5 PKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.43
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 376 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 552
RDR +ER + R H+P P + E R ++ + H+ R R+ H RR
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREREERHRERRHR 499
Query: 553 SGSRRHHRLARA 588
H+ +R+
Sbjct: 500 EKEETRHKSSRS 511
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.57
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 460 RLGAARHLHQQDHGLHQVRLRQPLHDHR 543
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S.
cerevisiae) protein.
Length = 594
Score = 32.7 bits (71), Expect = 0.99
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 376 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 552
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 553 SGSRRHHRLARA 588
H+ +R+
Sbjct: 535 EKEETRHKSSRS 546
>BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.99
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 376 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 552
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 499
Query: 553 SGSRRHHRLARA 588
H+ +R+
Sbjct: 500 EKEETRHKSSRS 511
>BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein.
Length = 328
Score = 32.7 bits (71), Expect = 0.99
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 376 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 552
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 209 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 268
Query: 553 SGSRRHHRLARA 588
H+ +R+
Sbjct: 269 EKEETRHKSSRS 280
>AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processing
factor FIP1 protein.
Length = 594
Score = 32.7 bits (71), Expect = 0.99
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 376 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 552
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 553 SGSRRHHRLARA 588
H+ +R+
Sbjct: 535 EKEETRHKSSRS 546
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.99
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 469 AARHLHQQDHGLHQVRLRQPLHDHR 543
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 364 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 492
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 364 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 492
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 364 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 492
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 364 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 492
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 1.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 230 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 376
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 376 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 477
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 364 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 492
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 340 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 456
R ++ G ARR R +VPG ARR PGPA +G
Sbjct: 257 RLSPESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 4.0
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 71 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 238
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 239 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 331
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 30.7 bits (66), Expect = 4.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 230 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 376
+YPA + D I + E+FRL+ + + +I + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 4.0
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 71 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 238
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 239 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 331
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosylase
protein.
Length = 351
Score = 30.3 bits (65), Expect = 5.3
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 117 GKHSRSLWGPVEGRGAYTPPSL 52
G RSLWGP G TPPSL
Sbjct: 300 GNFFRSLWGPYAGWAQATPPSL 321
>AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA
glycosylase protein.
Length = 341
Score = 30.3 bits (65), Expect = 5.3
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 117 GKHSRSLWGPVEGRGAYTPPSL 52
G RSLWGP G TPPSL
Sbjct: 290 GNFFRSLWGPYAGWAQATPPSL 311
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 221 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATG 385
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 385
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 149 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 182
>X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 398
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>X14085-1|CAA32247.1| 400|Homo sapiens
beta-1,4-galactosyltransferase (AA -77 to 323) protein.
Length = 400
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>U10474-1|AAA68220.1| 340|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 340
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>U10473-1|AAA68219.1| 308|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 308
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 72 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 105
>M70432-1|AAB00776.1| 400|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 400
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 385
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 149 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 182
>M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 397
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human
galactosyltransferase mRNA, 3' end. ).
Length = 261
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 25 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 58
>D29805-1|BAA06188.1| 398|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein.
Length = 225
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta
1,4-galactosyltransferase, polypeptide 1 protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 53 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 157
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
9 protein.
Length = 4486
Score = 29.5 bits (63), Expect = 9.2
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 338 EEAKYKLCKVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 505
E+A +C + R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 506 IKFDSGNLCMITGGRNLGRV 565
K D +LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
protein.
Length = 4486
Score = 29.5 bits (63), Expect = 9.2
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 338 EEAKYKLCKVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 505
E+A +C + R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 506 IKFDSGNLCMITGGRNLGRV 565
K D +LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein.
Length = 2992
Score = 29.5 bits (63), Expect = 9.2
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 338 EEAKYKLCKVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 505
E+A +C + R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 1383 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 1442
Query: 506 IKFDSGNLCMITGGRNLGRV 565
K D +LC+ G +NL V
Sbjct: 1443 -KMDLASLCLKAGVKNLNTV 1461
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,501,004
Number of Sequences: 237096
Number of extensions: 2012361
Number of successful extensions: 14955
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 14682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14954
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -