Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_K18
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 30 0.28
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.37
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 28 1.1
SPBC16G5.14c |rps3||40S ribosomal protein S3|Schizosaccharomyces... 27 2.6
SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr 1... 27 2.6
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 27 2.6
SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A... 27 3.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.4
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 26 4.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 4.5
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 26 6.0
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 26 6.0
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 26 6.0
SPCC126.05c |mrpl17||mitochondrial ribosomal protein subunit L17... 25 7.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.9
SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|... 25 7.9
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 25 7.9
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 25 7.9
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 30.3 bits (65), Expect = 0.28
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = -2
Query: 546 QLA*NIPFIIICLFFYL 496
++A NIPF++IC+FFY+
Sbjct: 487 RVAFNIPFLLICIFFYI 503
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.9 bits (64), Expect = 0.37
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 434 STSCFMSTTTPSSDSNCSAVVPTTLDPLEHSRVFPTGTFS 315
ST F +T + + D + S PT+ PL +S V PT TF+
Sbjct: 583 STGEFTNTNSGNGDVSGSVTTPTST-PLSNSTVAPTSTFT 621
Score = 29.5 bits (63), Expect = 0.48
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -3
Query: 533 ISPLSLFVSSFICTGSSMRLV*GCAYECCDSILSTSCFMSTTTPSSDSNCSAVVPTTL-- 360
++P S F SS T S + SI+ TS F S S N ++ +PT+
Sbjct: 645 VAPTSTFTSSGFNTTSGLPTSSASTPSSNSSIVPTSTFTS-----SGFNTTSGLPTSSAS 699
Query: 359 DPLEHSRVFPTGTFS 315
PL +S V PT TF+
Sbjct: 700 TPLSNSTVAPTSTFT 714
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3
Query: 437 LSTSCFMSTTT-PSSDSNCSAVVPTTL--DPLEHSRVFPTGTFS 315
LS S T+T SS N ++ +PT+ PL +S V PT TF+
Sbjct: 609 LSNSTVAPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFT 652
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 299 VLQERLKMSQSGTLESVLKDLKWW 370
V E ++ S+S LE++LKD WW
Sbjct: 833 VKNEHVRPSKSSELENLLKDDSWW 856
>SPBC16G5.14c |rps3||40S ribosomal protein S3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 503 KKRQIMIKGIFYASCDEANDCITIEVPSEEHVGDDVK 613
KKR+ + G+FYA E N+ T E+ E + G +V+
Sbjct: 9 KKRKFVADGVFYA---ELNEFFTRELSEEGYSGCEVR 42
>SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 486
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 2 FGTRRLLSEVESLKALNERLLSENAALRSEAAARSVPEAQRPAESTPR 145
F RL S++ K N L+++A +A + P +P E TPR
Sbjct: 14 FSNYRLRSQIIKYKYSNVSYLNKSALRCGQATDSTHPHILQPGELTPR 61
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 32 ESLKALNERLLSENAALRSEAAARSV---PEAQRPAESTPRQKEGHPEAVRAAR 184
+S K + E+ + + A + E+A S P+A+ P S+P+ K E V+ ++
Sbjct: 151 DSSKPIEEKPMPDLGAEQKESAPSSTKPAPDAKEPEFSSPKPKPAKSEPVKQSK 204
>SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 169 GSRGSHTAGDVSPLADLLAHFDSEEYLDTL-NQLADSLLQEIDASTTGKTENVPVGNTRE 345
G + S +A D+ + + E ++TL N+L + E+ A+ K VP G
Sbjct: 13 GGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNEKLATVPTGGAAS 72
Query: 346 CSKGSKVVGT--TAEQLESDE 402
+ + G AE+ +E
Sbjct: 73 AAPAAAAGGAAPAAEEAAKEE 93
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.4
Identities = 21/102 (20%), Positives = 47/102 (46%)
Frame = +2
Query: 26 EVESLKALNERLLSENAALRSEAAARSVPEAQRPAESTPRQKEGHPEAVRAARILLVMCL 205
+ ++ +++ + A++ S + + + +P STP + ++ + +
Sbjct: 445 QTTTVSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSASSPQST-LSTSSEV 503
Query: 206 LSQTSSHTSILKSTSIPSINLQTPSSKRLMQVLQERLKMSQS 331
+S+ SS T + S++IPS + TPSS + + L S S
Sbjct: 504 VSEVSS-TLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSS 544
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 244 YLDTLNQLADSLLQEIDASTTGKTENVPVGNTRECSKGSKVVGTTAE 384
YLD LAD LL + ST NV +G + + + +TAE
Sbjct: 151 YLDRAVDLADRLLAAYNTSTGLPRSNVNLGTRKSRKRTREYFVSTAE 197
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 4.5
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
Frame = -3
Query: 413 TTTPSSDSNCSAVVPTTLDPLEHSRVFPT-GTFSVFPVVLASISWRRESAS*LRVSRYSS 237
T+T S+D+N S+ +PTT S PT G+ S+ + ++ S++ + + S+
Sbjct: 210 TSTSSTDTN-SSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTST 268
Query: 236 ESKCARRSARGDTSPAVCEPRE-PPPGALPSAEE*TLLVFGPPGRFAPPPHCAALRSHST 60
S S TS + PP G + T+ PPP A+ S T
Sbjct: 269 SSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPP-ASTSSTGT 327
Query: 59 NVRLKPSGFPLRSRAASC 6
S PL S + SC
Sbjct: 328 ------SSSPLPSTSTSC 339
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 29 VESLKALNERLLSENAALRSEA 94
++ L+ NERLLSEN LR+ A
Sbjct: 35 IKELQLENERLLSENIDLRTTA 56
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 672 HSSDKSLSVRVLKSISISTGFTSSPTCSSEGTSMVM 565
+S D L + +++S+ST T+ P C+ +G MVM
Sbjct: 240 YSDDSLLKLYHPEALSLST--TNGPYCTGDGHKMVM 273
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 247 LDTLNQLADSLLQEIDASTTGKTENVPVGNTRECSKGSKVVGTTAEQLE 393
L+ + A+ LL+E+ A + N P GN++ +KV + E++E
Sbjct: 550 LENEDPTANVLLKEMIALISSDAINYPFGNSKVKGTANKVPDLSNEEIE 598
>SPCC126.05c |mrpl17||mitochondrial ribosomal protein subunit
L17|Schizosaccharomyces pombe|chr 3|||Manual
Length = 268
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 696 KGDSIFISHSSDKSLSVRVLKSISISTGFTSSPTCSSE 583
K D S DKSL + V KS S F ++P SSE
Sbjct: 142 KNDERSTLRSLDKSLYLLVKKSKSSGWQFPNTPVTSSE 179
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 666 SDKSLSVRVLKSISISTGFTSSPTCSSEGTSMVMQSFASSQL 541
+ SLS + S S S+ TSS SS +S S +SS +
Sbjct: 231 TSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSI 272
>SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 456
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 242 SSESKCARRSARGDTSPAVCEPREPPPGALPSA 144
S + +RR++ S +CEP PP + S+
Sbjct: 299 SVSANSSRRNSHDSNSTIICEPEYPPDTSFNSS 331
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 563 CITIEVPSEEHVGDDVKPVE 622
C+ +V SE +VGDD + ++
Sbjct: 371 CVVTDVQSEPYVGDDAETIQ 390
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 393 FQLLCCGPHHFRSFR 349
F LLCC P F FR
Sbjct: 506 FTLLCCSPERFLQFR 520
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,901,821
Number of Sequences: 5004
Number of extensions: 61477
Number of successful extensions: 270
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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