Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_K15
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 36 0.022
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 35 0.066
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 35 0.066
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 33 0.15
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 33 0.27
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 33 0.27
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 32 0.35
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 30 1.9
06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245 29 2.5
03_01_0249 - 1935355-1935827,1936129-1936330 29 2.5
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 29 4.3
08_02_0011 - 11234393-11235348,11235364-11235700 28 7.6
08_02_0009 + 11216532-11218687,11220727-11225998 28 7.6
08_02_0008 + 11212351-11214506,11214548-11214584 28 7.6
08_02_0007 + 11208170-11210325,11210367-11210403 28 7.6
08_02_0003 + 11180421-11180757,11180773-11185715 28 7.6
08_02_0002 + 11173365-11173512,11173528-11178470 28 7.6
07_03_1781 + 29468919-29468951,29469057-29469184,29469349-294694... 28 7.6
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 36.3 bits (80), Expect = 0.022
Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 12/179 (6%)
Frame = +3
Query: 135 DHRVLSADWPDFKPSTPFAQMPVLVIDGXQYAQSTAICRYLGRKYGIAGA------NEEE 296
D + + P+ PF QMP +S A+ RY+ RKY + A N E
Sbjct: 35 DFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTE 94
Query: 297 SFEIDQNVEF-LHDIRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGH 473
+ +D +E +H +S+ YE A + V + LEK+ +++
Sbjct: 95 AAMVDIGIEVEIHQYYPVISSIVYECLFN-PAMYGVPTNQKVVDNSLEKLKKVLEVYEAR 153
Query: 474 IAAGKLTWGDFV-FTGM----FEYLKMMLQIPDLEVKYPAFKKLTNNVLTLPXVKAYLA 635
++ G+F+ F + F + M L KYP K + + P +K A
Sbjct: 154 LSQNTYLAGNFLSFVDLSHFPFTFYFMATPYASLLDKYPHVKAWWDGLAARPSIKKVTA 212
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 105 LLSYGGQDFE----DHRVLSADWPDFKPSTPFAQMPVLVIDGXQYAQSTAICRYLGRKYG 272
+L+ G DF+ D R + P F PF Q+PVL +S AI RY+ KY
Sbjct: 25 VLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYK 84
Query: 273 IAGAN 287
GA+
Sbjct: 85 AEGAD 89
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 34.7 bits (76), Expect = 0.066
Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 13/181 (7%)
Frame = +3
Query: 135 DHRVLSADWPDFKPSTPFAQMPVLVIDGXQYA-QSTAICRYLGRKYGIAGA------NEE 293
D V+ P+ PF Q+P DG Y +S AI +Y+ RKY A N
Sbjct: 35 DFTVMEHKSPEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADLLREGNLR 93
Query: 294 ESFEIDQNVEF-LHDIRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNG 470
E+ +D E H + + + YE A + + V + EK+ +++
Sbjct: 94 EAAMVDVWTEVETHQYNSAISPIVYECIIN-PAMRGIPTNQKVVDESAEKLKKVLEVYEA 152
Query: 471 HIAAGKLTWGDFV-FTGM--FEYLKMMLQIP--DLEVKYPAFKKLTNNVLTLPXVKAYLA 635
++ GDFV F + F Y + P L YP K ++ P VK A
Sbjct: 153 RLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAA 212
Query: 636 L 638
+
Sbjct: 213 V 213
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 162 PDFKPSTPFAQMPVLVIDGXQYAQSTAICRYLGRKY--GIAGANEEESFEIDQNVEFLHD 335
P+ PF ++PVL QS AI RY+ RKY G E S E V+ D
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVDVWLD 103
Query: 336 IRA 344
+ A
Sbjct: 104 VEA 106
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 99 RMLLSYGGQDFEDHRVLSADWPDFKPSTPFAQMPVLVIDGXQYAQSTAICRYLGRKY 269
R++L+ G D+E V PD++ P +P LV + S AI YL KY
Sbjct: 21 RIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 32.7 bits (71), Expect = 0.27
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Frame = +3
Query: 162 PDFKPSTPFAQMPVLVIDGXQYAQSTAICRYLGRKYG-------IAGANEEESFEIDQ-- 314
PD PF Q+P +S AICRY+ RK+ + + ES +D
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKHRATDEANLLREGDPSESAVVDAWL 103
Query: 315 NVEFL-HDIRAKSASVFYEADEELKAKKHED-FAKNV--YPDMLEKIHAIIKKNNGHIAA 482
+VE L ++ + V L + E A++V + L A ++ G++A
Sbjct: 104 DVEALRYEPSVHAVFVQRRVVPALGGEPDERVIAESVARLRETLAVYEARLEATRGYLAG 163
Query: 483 GKLTWGDFVFTGMFEYLKMMLQIPDLEVKYPAFKKLT---NNVLTLPXVKAYLAL 638
G+++ D F Y + +++P + A+ ++T +LT P V+ A+
Sbjct: 164 GEVSLADL---SHFPYTRYFMEMPYEVPVFGAYPRVTAWWERLLTRPSVRKVAAM 215
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 32.3 bits (70), Expect = 0.35
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Frame = +3
Query: 183 PFAQMPVLVIDGXQYAQSTAICRYLGRKYG---IAGANEEESFEID--QNVEFLHDIRAK 347
PF Q+P +S AI +Y+ RK+G + +N ES +D VE H A
Sbjct: 51 PFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAM 110
Query: 348 SASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGDFV------ 509
S +F + D V + LEK+ ++ ++ K GDF+
Sbjct: 111 SPIIFQCFIVPMFMGGATDI--GVVNESLEKLKKALEVYEAQLSKSKYLAGDFISLADIS 168
Query: 510 -FTGMFEYLKMMLQIPDLEVKYPAFKKLTNNVLTLPXVK 623
F ++ YL LE YP K ++V+ P VK
Sbjct: 169 HFPTVY-YLLASAHASVLEA-YPRVKAWIDDVMQRPSVK 205
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 162 PDFKPSTPFAQMPVLVIDGXQYA-QSTAICRYLGRK 266
PD PF Q+P L DG + +S AIC+Y+ RK
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRK 78
>06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245
Length = 396
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 33 KILIMPKVVFHYFSCKALGESGRMLLSYGGQ--DFEDHRVLSADWPDFKPSTPFAQMPVL 206
KI I P++ K L E+G L++ G+ D +D + ADW K ++PVL
Sbjct: 190 KIRIFPRLEDTLAYAKMLEEAGASLVAVHGRTRDEKDGKKFRADWDAIKAVKDALRIPVL 249
Query: 207 VIDGXQYAQSTAIC 248
++ C
Sbjct: 250 ANGNIRHLDDVKDC 263
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 162 PDFKPSTPFAQMPVLVIDGXQYAQSTAICRYLGRKYGIAG 281
P F PF Q+P +S AICRY+ +Y +G
Sbjct: 45 PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -1
Query: 504 SHPMSTSQQRCVRYSSL*--WRESSPAYRGIRFSRSPHVSSPSV--LHQPRRTPMRTWR 340
S +S+S Q VR S+L WR A + +RSP +S P V + R +RT+R
Sbjct: 433 SSSVSSSSQPVVRTSALSRAWRRRWAALPSVDLARSPGISEPDVDAILLRRPAALRTFR 491
>08_02_0011 - 11234393-11235348,11235364-11235700
Length = 430
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 336 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 503
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 340 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 395
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 336 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 503
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 342 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 397
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 336 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 503
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 1056 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 1111
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 336 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 503
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 342 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 397
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 336 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 503
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 342 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 397
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 336 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 503
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 340 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 395
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 336 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 503
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 277 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 332
>07_03_1781 +
29468919-29468951,29469057-29469184,29469349-29469433,
29469771-29469824,29470072-29470163,29470280-29470383,
29470811-29470886,29471231-29471678,29471874-29471916,
29471977-29472209,29472302-29472505,29472595-29472693,
29472789-29472861,29473373-29473500,29473614-29473836,
29473992-29474215,29474296-29474423,29475053-29475167,
29475603-29475658,29475795-29475888,29475966-29476152,
29476229-29476309,29476384-29476484,29476567-29476629,
29476800-29476907
Length = 1059
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 45 MPKVVFHYFSCKALGESGRMLLSYGGQDFEDHRVLS 152
+P +V H+ S A G L YGG D VL+
Sbjct: 305 LPVIVLHWSSRSADSNKGGHLFVYGGDDMGSEEVLT 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,185,168
Number of Sequences: 37544
Number of extensions: 357968
Number of successful extensions: 918
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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