Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_K14
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29474-1|AAA60248.1| 1043|Homo sapiens RAG1 protein. 32 2.1
BC037344-1|AAH37344.1| 931|Homo sapiens RAG1 protein protein. 32 2.1
AY130302-1|AAM77798.1| 118|Homo sapiens truncated recombination... 32 2.1
BC033257-1|AAH33257.1| 746|Homo sapiens BCL9L protein protein. 30 6.4
AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein. 30 6.4
AK122650-1|BAC85500.1| 631|Homo sapiens (LGR7) mRNA. protein. 30 6.4
AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein. 30 6.4
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 30 8.5
>M29474-1|AAA60248.1| 1043|Homo sapiens RAG1 protein.
Length = 1043
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 182 PKSGVNAAPPAVRPPQLNCDVVPVGLFKGPANLQAPENFQRDVNCSFQ---ILDEDECIL 352
P G+++AP ++ P + LF+ + + PE Q++ SF+ L++ +L
Sbjct: 7 PTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKTPEEAQKEKKDSFEGKPSLEQSPAVL 66
Query: 353 PDDDSIAAPPPLQIISQKHPETAPSV-SSTKARSQIV 460
D P P Q + + HP+ + + KAR + +
Sbjct: 67 DKADG-QKPVPTQPLLKAHPKFSKKFHDNEKARGKAI 102
>BC037344-1|AAH37344.1| 931|Homo sapiens RAG1 protein protein.
Length = 931
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 182 PKSGVNAAPPAVRPPQLNCDVVPVGLFKGPANLQAPENFQRDVNCSFQ---ILDEDECIL 352
P G+++AP ++ P + LF+ + + PE Q++ SF+ L++ +L
Sbjct: 7 PTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKTPEEAQKEKKDSFEGKPSLEQSPAVL 66
Query: 353 PDDDSIAAPPPLQIISQKHPETAPSV-SSTKARSQIV 460
D P P Q + + HP+ + + KAR + +
Sbjct: 67 DKADG-QKPVPTQPLLKAHPKFSKKFHDNEKARGKAI 102
>AY130302-1|AAM77798.1| 118|Homo sapiens truncated recombination
activating gene 1 protein.
Length = 118
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 182 PKSGVNAAPPAVRPPQLNCDVVPVGLFKGPANLQAPENFQRDVNCSFQ---ILDEDECIL 352
P G+++AP ++ P + LF+ + + PE Q++ SF+ L++ +L
Sbjct: 7 PTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKTPEEAQKEKKDSFEGKPSLEQSPAVL 66
Query: 353 PDDDSIAAPPPLQIISQKHPETAPSV-SSTKARSQIV 460
D P P Q + + HP+ + + KAR + +
Sbjct: 67 DKADG-QKPVPTQPLLKAHPKFSKKFHDNEKARGKAI 102
>BC033257-1|AAH33257.1| 746|Homo sapiens BCL9L protein protein.
Length = 746
Score = 30.3 bits (65), Expect = 6.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = +2
Query: 221 PPQLNCDVVPVGLFKG----PANLQAPENFQ--RDVNCSFQILDEDECILPDDDSIAAPP 382
PPQ +VP GL +G P L +NF + ++ + +L S+ PP
Sbjct: 653 PPQQG--MVPHGLHQGVMSPPQGLMTQQNFMLMKQRGVGGEVYSQPPHMLSPQGSLMGPP 710
Query: 383 PLQIISQKHPETAPSVS 433
P Q + HP SVS
Sbjct: 711 PQQNLMVSHPLRQRSVS 727
>AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein.
Length = 1494
Score = 30.3 bits (65), Expect = 6.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = +2
Query: 221 PPQLNCDVVPVGLFKG----PANLQAPENFQ--RDVNCSFQILDEDECILPDDDSIAAPP 382
PPQ +VP GL +G P L +NF + ++ + +L S+ PP
Sbjct: 1401 PPQQG--MVPHGLHQGVMSPPQGLMTQQNFMLMKQRGVGGEVYSQPPHMLSPQGSLMGPP 1458
Query: 383 PLQIISQKHPETAPSVS 433
P Q + HP SVS
Sbjct: 1459 PQQNLMVSHPLRQRSVS 1475
>AK122650-1|BAC85500.1| 631|Homo sapiens (LGR7) mRNA. protein.
Length = 631
Score = 30.3 bits (65), Expect = 6.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = +2
Query: 221 PPQLNCDVVPVGLFKG----PANLQAPENFQ--RDVNCSFQILDEDECILPDDDSIAAPP 382
PPQ +VP GL +G P L +NF + ++ + +L S+ PP
Sbjct: 538 PPQQG--MVPHGLHQGVMSPPQGLMTQQNFMLMKQRGVGGEVYSQPPHMLSPQGSLMGPP 595
Query: 383 PLQIISQKHPETAPSVS 433
P Q + HP SVS
Sbjct: 596 PQQNLMVSHPLRQRSVS 612
>AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein.
Length = 1499
Score = 30.3 bits (65), Expect = 6.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = +2
Query: 221 PPQLNCDVVPVGLFKG----PANLQAPENFQ--RDVNCSFQILDEDECILPDDDSIAAPP 382
PPQ +VP GL +G P L +NF + ++ + +L S+ PP
Sbjct: 1406 PPQQG--MVPHGLHQGVMSPPQGLMTQQNFMLMKQRGVGGEVYSQPPHMLSPQGSLMGPP 1463
Query: 383 PLQIISQKHPETAPSVS 433
P Q + HP SVS
Sbjct: 1464 PQQNLMVSHPLRQRSVS 1480
>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
Length = 1709
Score = 29.9 bits (64), Expect = 8.5
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 5/131 (3%)
Frame = +2
Query: 47 EHVRPEESLKNNIKKPSETNDYKRAKSNEEKQDTSQ---GSFTVYQMRPKSGVNAAPPAV 217
+H + ++ +K+ + + + EE++++S T ++ SG P
Sbjct: 486 QHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSSMVLGARDTGSEVPSGSGHGPCTPPP 545
Query: 218 RPPQLNCDVVPVGLFKGPANLQAPE-NFQRDVN-CSFQILDEDECILPDDDSIAAPPPLQ 391
P DV P G + A ++P+ N Q + CS D+ + DDD +PPP
Sbjct: 546 APANFE-DVAPTGSGEPGATRESPKANGQNQASPCS----SGDDMEISDDDRGGSPPPAP 600
Query: 392 IISQKHPETAP 424
Q+ P P
Sbjct: 601 TPPQQPPPPPP 611
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,295,345
Number of Sequences: 237096
Number of extensions: 1700664
Number of successful extensions: 5914
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5905
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -