Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_K10
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1455 + 27230134-27231110,27231195-27231327,27231417-272315... 31 0.71
01_04_0066 - 15654796-15655098,15655268-15655392,15657249-156576... 30 2.2
04_02_0006 + 8455219-8457469,8457560-8457924 29 3.8
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 29 5.0
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 28 6.6
01_05_0111 - 18230195-18230239,18230541-18230615,18231379-182315... 28 6.6
12_02_0412 - 18799217-18801061 28 8.8
12_01_1102 + 11622839-11623341,11623441-11623750 28 8.8
08_02_0040 - 11526922-11527319,11528229-11528511 28 8.8
05_04_0113 + 18085705-18085833,18086442-18086885 28 8.8
02_03_0247 - 16809742-16809780,16810070-16810298,16810381-168105... 28 8.8
02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079 28 8.8
>08_02_1455 +
27230134-27231110,27231195-27231327,27231417-27231501,
27233372-27233571
Length = 464
Score = 31.5 bits (68), Expect = 0.71
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = -1
Query: 371 NPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVP 192
+PG V +P P LSSA A AA S+ L S P A P +P P++P
Sbjct: 17 SPGQPPVVPRSPTPLDLSSAAAAAAAASYRRLSPSLRPPA------HPQARLPSPYPQIP 70
Query: 191 SELSVRAPCAS 159
S S A +S
Sbjct: 71 SSSSAAAAGSS 81
>01_04_0066 -
15654796-15655098,15655268-15655392,15657249-15657603,
15658236-15658405,15659404-15659608
Length = 385
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = -3
Query: 675 HEGCIELLEAGVEIDRGVRTLEE---VQLSVQGVIVTIDEVRVSGGR*CTNLIF--EHIV 511
H+ + +A V +D T E+ LS+ G V I+EV+ + R C ++ + +
Sbjct: 120 HDCFVRGCDASVLLDSASNTAEKNAAPNLSLAGFEV-IEEVKAAVERECAGVVSCADIVA 178
Query: 510 YSATDSVEVGYXSDIWHISGG 448
+A DSV Y +W + G
Sbjct: 179 LAARDSVSYQYRRSLWEVETG 199
>04_02_0006 + 8455219-8457469,8457560-8457924
Length = 871
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 404 FTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSL 231
F P +V+L N G+C ++ + P SS PA + LL+K I + +F +L
Sbjct: 437 FQRPNSVSLEGNKGLCANIHILNLPICPSS--PAKTKNNKRLLLKVIPSITIALFSAL 492
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 412 HNDXHDITAKAFATRNMPDIAXVPNFNTVGGGIDYMFKDKIG 537
+ND H A++ N P +A N N G ++Y+F DK G
Sbjct: 377 NNDLHMYHAES----NTPALARTSNLNEELGQVEYIFSDKTG 414
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -1
Query: 359 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 186
C S L P ++ SA + P+ C L+ P F L A+G P PE
Sbjct: 467 CASTELAENPTSVDSAVDHITEPTSCTLIVRVMP----TFTVLAAEGLAYKPTPETRVHG 522
Query: 185 LSVRAPCASLR 153
+RA CA ++
Sbjct: 523 AQLRADCAKVQ 533
>01_05_0111 -
18230195-18230239,18230541-18230615,18231379-18231566,
18232416-18232739,18232926-18233115
Length = 273
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 598 KLNLFKSPDTSVDFNARFKKFDTPFMKSSWEPNF 699
K+ FK+ D + FN+R K F ++S WE F
Sbjct: 121 KIKKFKTGDKVLMFNSRVKLFGHGKLRSKWEGPF 154
>12_02_0412 - 18799217-18801061
Length = 614
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 513 VYSATDSVEVGYXSDIWHISGGESLRCDVV 424
+YS+ +E G D+W+I GG L V+
Sbjct: 23 IYSSETDLEEGVFHDVWNICGGMPLAMIVI 52
>12_01_1102 + 11622839-11623341,11623441-11623750
Length = 270
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 598 KLNLFKSPDTSVDFNARFKKFDTPFMKSSWEPNF 699
K+ FK D + FN+R K F ++S WE F
Sbjct: 221 KMKKFKPGDNVLMFNSRVKLFGHGKLRSKWEGPF 254
>08_02_0040 - 11526922-11527319,11528229-11528511
Length = 226
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 598 KLNLFKSPDTSVDFNARFKKFDTPFMKSSWEPNF 699
K+ FK D + FN+R K F ++S WE F
Sbjct: 44 KIKKFKPGDKVLMFNSRVKLFGHEKLRSKWEGPF 77
>05_04_0113 + 18085705-18085833,18086442-18086885
Length = 190
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Frame = +1
Query: 121 EEPELLTSSRVRRDAHGALTLNSD-------GTSGAGVKVPFAGNDKNIVSAIGSLDL-- 273
E+ TS+R R G LT+ ++ G GAG ++P AG D + G +
Sbjct: 30 EDSPAATSTRKRLVGSGKLTIVAEIPRLALGGGGGAGERLPAAGEDSAAATNTGKCQVVG 89
Query: 274 TNRQKLGAATAGVALD 321
++ + AA+AG+ D
Sbjct: 90 SSLAAMVAASAGIQPD 105
>02_03_0247 -
16809742-16809780,16810070-16810298,16810381-16810551,
16810630-16811516,16811604-16812050,16812129-16812836
Length = 826
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = -1
Query: 359 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 186
C S L P ++ SA + P+ C L P F L A+G P PE
Sbjct: 365 CASTELAENPTSIDSAVDHITEPTSCTLTVRVMP----TFTVLAAEGLAYKPTPETTVHG 420
Query: 185 LSVRAPCASLR 153
+RA CA ++
Sbjct: 421 AQLRADCAKVQ 431
>02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079
Length = 288
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 598 KLNLFKSPDTSVDFNARFKKFDTPFMKSSWEPNF 699
K+ FK D + FN+R K F ++S WE F
Sbjct: 143 KIKKFKPGDKVLMFNSRVKLFGHGKLRSKWEAPF 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,742,477
Number of Sequences: 37544
Number of extensions: 432875
Number of successful extensions: 1392
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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