Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_K05
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   161   4e-42
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   161   4e-42
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   1.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.0  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  161 bits (392), Expect = 4e-42
 Identities = 74/85 (87%), Positives = 79/85 (92%)
 Frame = +2

Query: 2   WAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKG 181
           W IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEGG AFFKG
Sbjct: 216 WGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275

Query: 182 AFSNVLRGTGGAFVLVLYDEIKKLL 256
           AFSN+LRGTGGA VLVLYDEIK LL
Sbjct: 276 AFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 31.9 bits (69), Expect = 0.005
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +2

Query: 5   AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGGAAFFK 178
           A A + TTVA     P + V+  + +Q  S +   +  YK  I C+  I K +G  ++++
Sbjct: 20  AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74

Query: 179 GAFSNVLR 202
           G  +NV+R
Sbjct: 75  GNLANVIR 82



 Score = 27.1 bits (57), Expect = 0.14
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 47  YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKG 181
           YP D  R R+    G+A  +  +    +C   I K +G    ++G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  161 bits (392), Expect = 4e-42
 Identities = 74/85 (87%), Positives = 79/85 (92%)
 Frame = +2

Query: 2   WAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKG 181
           W IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEGG AFFKG
Sbjct: 216 WGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275

Query: 182 AFSNVLRGTGGAFVLVLYDEIKKLL 256
           AFSN+LRGTGGA VLVLYDEIK LL
Sbjct: 276 AFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 31.9 bits (69), Expect = 0.005
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +2

Query: 5   AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGGAAFFK 178
           A A + TTVA     P + V+  + +Q  S +   +  YK  I C+  I K +G  ++++
Sbjct: 20  AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74

Query: 179 GAFSNVLR 202
           G  +NV+R
Sbjct: 75  GNLANVIR 82



 Score = 27.1 bits (57), Expect = 0.14
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 47  YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKG 181
           YP D  R R+    G+A  +  +    +C   I K +G    ++G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 410 NPLFY*KKKCYIIFSLSDTLVKDFKFNVEEVE 505
           N L      C I F+ S  + KD KFN+  ++
Sbjct: 243 NTLLSISASCVIAFATSALVSKDSKFNMVHIQ 274


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 56  DTVRRRMMMQSGRAKSDILYKNTI 127
           DT+ R+ ++   + K D LY N +
Sbjct: 289 DTLIRKYIIPKEQVKEDSLYTNIV 312


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,612
Number of Sequences: 438
Number of extensions: 3211
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)