Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_K01
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    28   3.2  
AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical ...    28   4.2  
Z81564-5|CAB04569.1|  656|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AL110500-7|CAB54490.1|  489|Caenorhabditis elegans Hypothetical ...    27   7.3  
U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical...    27   9.7  
AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical...    27   9.7  

>Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical
           protein T06E4.8 protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +1

Query: 154 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 270
           V A P P F+ P+  P     PI  GPAF     P   P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148


>Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical
           protein T06E4.9 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 154 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 270
           V A P P F+ P+  P     P+  GPAF     P   P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161


>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +2

Query: 86  CTWSIITLIIIQARFTWWTIVVLLLRTRILSSLNHQTVLA 205
           CTW    L+ +    +WW   V+   T     LN    LA
Sbjct: 229 CTWGYTALVFVSGTLSWWEPTVIQHLTAWHQGLNDTKDLA 268


>AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical
           protein F23H11.2 protein.
          Length = 865

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 11/50 (22%), Positives = 29/50 (58%)
 Frame = -2

Query: 288 RVVVSLGWIIGMIEIDERRSSAYGFIISARTV*WLREERIRVRNNNTTIV 139
           +++++L  ++ ++      SS Y  I+++  V W+RE+R R+   +  ++
Sbjct: 288 QLILNLEMLVAILH-SALMSSGYQTILTSDVVRWIREDRFRISRRSIRLI 336


>Z81564-5|CAB04569.1|  656|Caenorhabditis elegans Hypothetical
           protein K05C4.5 protein.
          Length = 656

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +1

Query: 139 DNSGVVIANPDPFFSQPSNGPSGNYEPIS--TGPA 237
           DNS + IA  DP  ++     +GNYE ++  TGPA
Sbjct: 214 DNSTLNIAGVDPRITELRETRNGNYEIVNRRTGPA 248


>AL110500-7|CAB54490.1|  489|Caenorhabditis elegans Hypothetical
           protein Y87G2A.7 protein.
          Length = 489

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 103 NPDYNPGQVHVVDNSGVVIANPDPFFSQPSNGPSGN 210
           +P   PG   V++ +G +I+ P+  F QPS    GN
Sbjct: 2   DPPRPPGTRLVLNTAGHLISVPESMFDQPSTSFWGN 37


>U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical
           protein F47E1.3 protein.
          Length = 594

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
 Frame = +1

Query: 163 NPDPFFSQP--SNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPL 291
           +P PF + P  SN         S  P F  +     PP R  +PL
Sbjct: 90  SPPPFMTSPATSNNSVSVARKTSAPPGFAQYEPDTAPPSRSTSPL 134


>AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical
           protein W02D3.11b protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 166 PDPFFSQPSNGPSGNYEPIS 225
           P PF S P   P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238


>AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical
           protein W02D3.11a protein.
          Length = 549

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 166 PDPFFSQPSNGPSGNYEPIS 225
           P PF S P   P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,264,461
Number of Sequences: 27780
Number of extensions: 211730
Number of successful extensions: 613
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)