Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_J21
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical...    31   0.86 
Z74030-12|CAA98434.1|  320|Caenorhabditis elegans Hypothetical p...    30   1.5  
AC024856-2|AAF60870.1|  224|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF036700-1|AAB88364.1|  258|Caenorhabditis elegans Hypothetical ...    29   2.6  
U53180-3|AAA96284.1|  727|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z81508-5|CAB04138.1|  357|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical
           protein Y47D3B.3 protein.
          Length = 446

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = -1

Query: 279 TAFLSYCL--CTTSE-GSTD*FV--NRPEAMITLALPVHCP*KCDSTRGSPCT 136
           T FLS+C   C T+E  ST   +  +  EA +      HCP  CD  R   CT
Sbjct: 317 TIFLSFCFVSCNTTETNSTTTPIPHSTSEAPLKCTRDYHCPSSCDVCRSGICT 369


>Z74030-12|CAA98434.1|  320|Caenorhabditis elegans Hypothetical
           protein D1054.14 protein.
          Length = 320

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +1

Query: 268 EESCAVGALGAFLAPLSPHSTAALKYAPPLHDLARKLFHHLLRRGRLEKA-LSLGVD-LC 441
           EE   + ALGA    L+  ST   KY  PL++  RKL  ++ + GR E   +   +D L 
Sbjct: 94  EEFKYIRALGAMYLRLTFDSTEIYKYLEPLYNDFRKL-RYMNKMGRFEAIYMDDFIDNLL 152

Query: 442 AWDLFCD 462
             D +CD
Sbjct: 153 REDRYCD 159


>AC024856-2|AAF60870.1|  224|Caenorhabditis elegans Hypothetical
           protein Y71G10AR.1 protein.
          Length = 224

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 55  PVILGSFTGGPLMLLYIAHPRLLTAWIRARRS 150
           PVI+ +FT GPL+L    H  L   W+R RR+
Sbjct: 147 PVIVAAFTPGPLLLGAAVH--LTFKWMRNRRN 176


>AF036700-1|AAB88364.1|  258|Caenorhabditis elegans Hypothetical
           protein M04G7.1 protein.
          Length = 258

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +3

Query: 279 CGR-CTRCIFSAPLSPLYSCAEV---CASPPRPC 368
           C R C  C  +AP+SP Y+C ++   CA+    C
Sbjct: 133 CARTCNMCYSTAPVSPQYACTDLLTDCANRTASC 166


>U53180-3|AAA96284.1|  727|Caenorhabditis elegans Hypothetical
           protein D1014.5 protein.
          Length = 727

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 405 STTPEQVMEKLPSKVVEGRRILQRSCRVGREGR*KCTECTDRTA 274
           +TT  +V ++ PSK  E  +  Q S  V +EG  + T  +D +A
Sbjct: 208 TTTENKVADEAPSKEAESIQASQDSDHVEKEGESETTTTSDESA 251


>Z81508-5|CAB04138.1|  357|Caenorhabditis elegans Hypothetical
           protein F20E11.7 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 222 QTSLCCPQKWCRGSRRGKL-CGRCTRCIFSAPLSPLYSC 335
           QT + C Q W R  +RG+L C  CT   F  P+ P  +C
Sbjct: 254 QTCVSCMQTWLR-LKRGRLPCQTCT--AFMDPMVPEATC 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,793,277
Number of Sequences: 27780
Number of extensions: 294805
Number of successful extensions: 750
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)