Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_J12
         (307 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U79278-1|AAB50217.1|  421|Homo sapiens protein disulfide isomera...    57   1e-08
D49489-1|BAA08450.1|  440|Homo sapiens human P5 protein.               57   1e-08
BC001312-1|AAH01312.1|  440|Homo sapiens protein disulfide isome...    57   1e-08
AK127433-1|BAC86977.1|  492|Homo sapiens protein ( Homo sapiens ...    57   1e-08
AC092687-3|AAY24070.1|  440|Homo sapiens unknown protein.              57   1e-08
AY358539-1|AAQ88903.1|  100|Homo sapiens SAMK3000 protein.             32   0.38 
AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens ...    28   4.6  
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    28   4.6  
AK127866-1|BAC87168.1|  204|Homo sapiens protein ( Homo sapiens ...    27   8.1  

>U79278-1|AAB50217.1|  421|Homo sapiens protein disulfide
           isomerase-related protein 5 protein.
          Length = 421

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1   GAEMPKITTTEPWDGNDGELPLEEDIDLSDV---DLEKDEL 114
           G   P I   EPWDG DGELP+E+DIDLSDV   DL KDEL
Sbjct: 381 GGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLGKDEL 421


>D49489-1|BAA08450.1|  440|Homo sapiens human P5 protein.
          Length = 440

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1   GAEMPKITTTEPWDGNDGELPLEEDIDLSDV---DLEKDEL 114
           G   P I   EPWDG DGELP+E+DIDLSDV   DL KDEL
Sbjct: 400 GGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLGKDEL 440


>BC001312-1|AAH01312.1|  440|Homo sapiens protein disulfide
           isomerase family A, member 6 protein.
          Length = 440

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1   GAEMPKITTTEPWDGNDGELPLEEDIDLSDV---DLEKDEL 114
           G   P I   EPWDG DGELP+E+DIDLSDV   DL KDEL
Sbjct: 400 GGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLGKDEL 440


>AK127433-1|BAC86977.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45525 fis, clone BRTHA2026311, highly  similar
           to Protein disulfide isomerase A6 precursor (EC
           5.3.4.1). ).
          Length = 492

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1   GAEMPKITTTEPWDGNDGELPLEEDIDLSDV---DLEKDEL 114
           G   P I   EPWDG DGELP+E+DIDLSDV   DL KDEL
Sbjct: 452 GGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLGKDEL 492


>AC092687-3|AAY24070.1|  440|Homo sapiens unknown protein.
          Length = 440

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1   GAEMPKITTTEPWDGNDGELPLEEDIDLSDV---DLEKDEL 114
           G   P I   EPWDG DGELP+E+DIDLSDV   DL KDEL
Sbjct: 400 GGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLGKDEL 440


>AY358539-1|AAQ88903.1|  100|Homo sapiens SAMK3000 protein.
          Length = 100

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +3

Query: 123 INSELCIVLHSVLCYVLCACVLTCR 197
           + + +C+ ++  +C VLCACV TCR
Sbjct: 26  VRAHVCVCVYMCMC-VLCACVCTCR 49


>AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31338 fis, clone MAMGL1000184. ).
          Length = 181

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 135 LCIVLHSVLCYVLCACVLTC 194
           +C+ +H   C  +C CVL C
Sbjct: 133 MCVCVHVCACVYVCMCVLVC 152


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 123 INSELCIVLHSVLCYVLCACVLTC 194
           + + LC+ +H  +C  LC C   C
Sbjct: 19  VGAHLCVWVHICVCVRLCGCTFVC 42


>AK127866-1|BAC87168.1|  204|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45969 fis, clone PLACE7016454. ).
          Length = 204

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 120 NINSELCIVLHSVLCYVLCACV 185
           N    LC+ +H  +C  +CACV
Sbjct: 40  NQKQGLCVCVHVCICACICACV 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,622,599
Number of Sequences: 237096
Number of extensions: 396519
Number of successful extensions: 1798
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)