Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_J12
         (307 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.28 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.28 
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   2.6  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   2.6  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   2.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   3.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   6.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   7.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.28
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 258 YLCVKKLRNLNHLQRQVTYLSD 193
           +LC   + NL+ L R+  YLSD
Sbjct: 311 FLCYPSVMNLDDLTRRSLYLSD 332



 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 180 CVLTCRINKLLVAVSDLNFLTF*HINKSLHFVFFLSAR 293
           C   C++N +L+ V     LTF +I   ++ V+ L  +
Sbjct: 242 CSGNCKLNDILLTVRPHLELTFENILSHINTVYVLRTK 279


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.28
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 258 YLCVKKLRNLNHLQRQVTYLSD 193
           +LC   + NL+ L R+  YLSD
Sbjct: 311 FLCYPSVMNLDDLTRRSLYLSD 332



 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 180 CVLTCRINKLLVAVSDLNFLTF*HINKSLHFVFFLSAR 293
           C   C++N +L+ V     LTF +I   ++ V+ L  +
Sbjct: 242 CSGNCKLNDILLTVRPHLELTFENILSHINTVYVLRTK 279


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 280 KNTKCKDLFMCQKVKKFKSLTATSNLFIR 194
           KN    D F   + + +  +  TSN FIR
Sbjct: 91  KNIWVPDTFFVNEKQSYFHIATTSNEFIR 119


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 280 KNTKCKDLFMCQKVKKFKSLTATSNLFIR 194
           KN    D F   + + +  +  TSN FIR
Sbjct: 91  KNIWVPDTFFVNEKQSYFHIATTSNEFIR 119


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 280 KNTKCKDLFMCQKVKKFKSLTATSNLFIR 194
           KN    D F   + + +  +  TSN FIR
Sbjct: 30  KNIWVPDTFFVNEKQSYFHIATTSNEFIR 58


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 64  LEEDIDLSDVDLEKDE 111
           L+E ++ +D+DLEK E
Sbjct: 299 LDEKLERNDLDLEKYE 314


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 283 KKNTKCKDLFMCQKVKKFKSLTATSNL 203
           KK  K KD+ +    +  +SLT T N+
Sbjct: 697 KKVKKDKDIILNVPKESTQSLTTTGNV 723


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 206 LIYPTSKHTRTQHIAQNTMK 147
           +I    KH  T+H  +N MK
Sbjct: 216 IILEDIKHINTRHNTKNGMK 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,942
Number of Sequences: 438
Number of extensions: 854
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)